RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 EEDO75530 441 aaKnown RBP11.04□□□□□ -0.64
PTPN7-201ENST00000309017 GRIK1P39086 918 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 PLA2G4EQ3MJ16 856 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 PAGE2Q7Z2X7 111 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 NANOGNBQ7Z5D8 188 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 METTL23Q86XA0 190 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 OR56A4Q8NGH8 313 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 OR10A6Q8NH74 314 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 SLC47A1Q96FL8 570 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 CNDP2Q96KP4 475 aaKnown RBP11.04□□□□□ -0.64
PTPN7-201ENST00000309017 RIBC2Q9H4K1 309 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 ACTR8Q9H981 624 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 LCTP09848 1927 aa11.04□□□□□ -0.64
PTPN7-201ENST00000309017 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 IRAK2O43187 625 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ECI2O75521 394 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PRSS56P0CW18 603 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 KCNE1P15382 129 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CLK1P49759 484 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SEPHS1P49903 392 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CLCNKBP51801 687 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 EPS8Q12929 822 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ZNF235Q14590 738 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 OXA1LQ15070 435 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 COQ5Q5HYK3 327 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SIRPB2Q5JXA9 342 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ANKRD34AQ69YU3 496 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 GPRIN3Q6ZVF9 776 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 C14orf80Q86SX3 495 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SLC22A16Q86VW1 577 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CNIH3Q8TBE1 160 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 MCOLN3Q8TDD5 553 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 RMDN1Q96DB5 314 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 TMEM209Q96SK2 561 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 TDRD1Q9BXT4 1180 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 MROQ9BYG7 248 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ASPSCR1Q9BZE9 553 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CPA4Q9UI42 421 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 DNAJC25-GNG10A0A024R161 153 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 FAM234BA2RU67 622 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 H0Y626 953 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CACNG3O60359 315 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 TRIM16O95361 564 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ANGPTL1O95841 491 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 JUNBP17275 347 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SLC26A3P40879 764 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ERVK-8P63133 956 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CDC42EP1Q00587 391 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SELPLGQ14242 412 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ENPP6Q6UWR7 440 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PTRH1Q86Y79 214 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CHDHQ8NE62 594 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CAPSLQ8WWF8 208 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 HMCESQ96FZ2 354 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CGREF1Q99674 301 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SEMA3CQ99985 751 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 EIF2B4Q9UI10 523 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 POLR3HQ9Y535 204 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PTCH2Q9Y6C5 1203 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 B3GAT3O94766 335 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 HMBSP08397 361 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 UROSP10746 265 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 FMO3P31513 532 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PIGAP37287 484 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 NFKB2Q00653 900 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 EMX2Q04743 252 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 TOP3AQ13472 1001 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SGO1Q5FBB7 561 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 DSG4Q86SJ6 1040 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PHYKPLQ8IUZ5 450 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 CCDC117Q8IWD4 279 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SCML4Q8N228 414 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 RTL3Q8N8U3 475 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 OR10Q1Q8NGQ4 319 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 OR4L1Q8NH43 312 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 PSMG2Q969U7 264 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 AURKBQ96GD4 344 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ITCHQ96J02 903 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 FEM1AQ9BSK4 669 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ZNF408Q9H9D4 720 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SCN3BQ9NY72 215 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ENPP5Q9UJA9 477 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 SCN4AP35499 1836 aa11.03□□□□□ -0.64
PTPN7-201ENST00000309017 ASPDHA6ND91 283 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 MEIS3P2A8K0S8 358 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 E5RI56 91 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 PFDN6O15212 129 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 FADS2O95864 444 aaKnown RBP11.02□□□□□ -0.64
PTPN7-201ENST00000309017 SMIM10L2AP0DMW4 78 aa11.02□□□□□ -0.64
PTPN7-201ENST00000309017 SMIM10L2BP0DMW5 78 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms