RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ASLP04424 464 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 ANXA4P09525 319 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 CYP4B1P13584 511 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CYP4F3Q08477 520 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 NDUFAF6Q330K2 333 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 SYPL2Q5VXT5 272 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 TRMT10BQ6PF06 316 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 PTCHD4Q6ZW05 846 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 GALNT13Q8IUC8 556 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 FAM47BQ8NA70 645 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 SIDT2Q8NBJ9 832 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 CMASQ8NFW8 434 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 BTBD9Q96Q07 612 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 WRAP53Q9BUR4 548 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 UNC93B1Q9H1C4 597 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CCDC177Q9NQR7 707 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 TRPS1Q9UHF7 1281 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 BTBD3Q9Y2F9 522 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 Q9Y3F1 56 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 COLEC10Q9Y6Z7 277 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 DNAJA2O60884 412 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 PCCBP05166 539 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 C8AP07357 584 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 WASP42768 502 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 SLC1A2P43004 574 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 LSM3P62310 102 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 ZDHHC24Q6UX98 284 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 RBM44Q6ZP01 1051 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 RALGPS2Q86X27 583 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 CFAP206Q8IYR0 622 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 LPGAT1Q92604 370 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 SLCO2A1Q92959 643 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CNTN3Q9P232 1028 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 LRP6O75581 1613 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 GRIN2DO15399 1336 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 ARFGEF2Q9Y6D5 1785 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 UNCXA6NJT0 531 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 NSG1P42857 185 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 MTHFRP42898 656 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 ZNF132P52740 706 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 TAS2R39P59534 338 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 C2orf80Q0P641 193 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 MZT2BQ6NZ67 158 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 KBTBD2Q8IY47 623 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CPNE9Q8IYJ1 553 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 TWNKQ96RR1 684 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CLEC4MQ9H2X3 399 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 FADS3Q9Y5Q0 445 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 H3BNH8 94 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 DBTP11182 482 aaKnown RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 IL1R2P27930 398 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 PNLIPRP1P54315 467 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 GAD2Q05329 585 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 LIPEQ05469 1076 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 ZNF460Q14592 562 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 TPGS2Q68CL5 300 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 CDCA2Q69YH5 1023 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 MPP5Q8N3R9 675 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 C2orf73Q8N5S3 287 aaPredicted RBP15.79■□□□□ 0.12
USP42-201ENST00000306177 DCBLD1Q8N8Z6 715 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 NAT8LQ8N9F0 302 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 KCTD13Q8WZ19 329 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 PNPLA8Q9NP80 782 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 U3KQV3 271 aa15.79■□□□□ 0.12
USP42-201ENST00000306177 IQCF5A8MTL0 148 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 ERN1O75460 977 aaKnown RBP15.78■□□□□ 0.12
USP42-201ENST00000306177 C8GP07360 202 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 EIF2B2P49770 351 aaKnown RBP15.78■□□□□ 0.12
USP42-201ENST00000306177 IDH3AP50213 366 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 LGALS3BPQ08380 585 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 KREMEN2Q8NCW0 462 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 OR14C36Q8NHC7 312 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 NUSAP1Q9BXS6 441 aaKnown RBP15.78■□□□□ 0.12
USP42-201ENST00000306177 ZDHHC18Q9NUE0 388 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 SEC14L3Q9UDX4 400 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 AK5Q9Y6K8 562 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 OR4F21O95013 312 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 VIPP01282 170 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 AQP1P29972 269 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 DGKGP49619 791 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 CHIT1Q13231 466 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 ATP13A5Q4VNC0 1218 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 FBXO48Q5FWF7 155 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 GPR107Q5VW38 600 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 ARMC3Q5W041 872 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 PNPT1Q8TCS8 783 aaKnown RBP15.78■□□□□ 0.12
USP42-201ENST00000306177 ROPN1LQ96C74 230 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 CACNG4Q9UBN1 327 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 NR2F6P10588 404 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 STAT5AP42229 794 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 ZSWIM7Q19AV6 140 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 GCNT6Q5T4J0 391 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 PLEKHG4BQ96PX9 1271 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
USP42-201ENST00000306177 TCHHQ07283 1943 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 A8MUI8 341 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 RGS21Q2M5E4 152 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 NCBP2-AS2Q69YL0 99 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms