RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ITIH4Q14624 930 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PRRT3Q5FWE3 981 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 MPP7Q5T2T1 576 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 ZCCHC8Q6NZY4 707 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CLYBLQ8N0X4 340 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PQLC3Q8N755 202 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 Q8N9G6 341 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RDH11Q8TC12 318 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 FAM120BQ96EK7 910 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PGM2Q96G03 612 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CXCL16Q9H2A7 254 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 ABLIM1O14639 778 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 OCM2P0CE71 109 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 OCMP0CE72 109 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 TSPAN8P19075 237 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 GTF2E2P29084 291 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RBMS1P29558 406 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HSD17B2P37059 387 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RPL14P50914 215 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CASP6P55212 293 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 MRPS21P82921 87 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 GAREM2Q75VX8 874 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PATL1Q86TB9 770 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RASGRP3Q8IV61 690 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 SIDT2Q8NBJ9 832 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 AENQ8WTP8 325 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PLEKHA8Q96JA3 519 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PPP3R2Q96LZ3 170 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 SORCS3Q9UPU3 1222 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 IGLON5A6NGN9 336 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 OR51F1A6NGY5 319 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CLDN4O14493 209 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 IPO13O94829 963 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 JMJD7P0C870 316 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HGFP14210 728 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF8P17098 575 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 JUNDP17535 347 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CLK3P49761 638 aaKnown RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 KIAA1161Q6NSJ0 714 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 DENND6AQ8IWF6 608 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 LRRC34Q8IZ02 419 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 SCML4Q8N228 414 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 MIER2Q8N344 545 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 PGAP3Q96FM1 320 aaPredicted RBP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 STOML1Q9UBI4 398 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF780BQ9Y6R6 833 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CASP8AP2Q9UKL3 1982 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 SLC28A1O00337 649 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 COL6A2P12110 1019 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 CCR4P51679 360 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HNRNPKP61978 463 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTPRE-202ENST00000306042 AP2B1P63010 937 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 ICE2Q659A1 982 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HEATR4Q86WZ0 1026 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 HORMAD1Q86X24 394 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 NCSTNQ92542 709 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 OR2M4Q96R27 311 aa9.16□□□□□ -0.94
PTPRE-202ENST00000306042 RGPD3A6NKT7 1758 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-202ENST00000306042 RGPD4Q7Z3J3 1758 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 SOBPA7XYQ1 873 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 C9J4A7 227 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 OR1F1O43749 312 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 LBPP18428 481 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 FECHP22830 423 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 ETV3P41162 512 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 GUCA1AP43080 201 aaPredicted RBP9.15□□□□□ -0.94
PTPRE-202ENST00000306042 OCA2Q04671 838 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 LAPTM5Q13571 262 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 LYSMD4Q5XG99 296 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 FAAH2Q6GMR7 532 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 TRIM40Q6P9F5 258 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 KDM7AQ6ZMT4 941 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 ZNF621Q6ZSS3 439 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 TMEM132CQ8N3T6 1108 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 CATSPER2Q96P56 530 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 MRPS30Q9NP92 439 aaKnown RBP9.15□□□□□ -0.94
PTPRE-202ENST00000306042 HPS4Q9NQG7 708 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 APOBEC3BQ9UH17 382 aaKnown RBP9.15□□□□□ -0.94
PTPRE-202ENST00000306042 PCDHB3Q9Y5E6 796 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 A8MU76 341 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 F11P03951 625 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 SRCP12931 536 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 LIMK2P53671 638 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 SEC24CP53992 1094 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 CDH13P55290 713 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 HNRNPA1L2Q32P51 320 aaKnown RBP9.15□□□□□ -0.94
PTPRE-202ENST00000306042 BHLHB9Q6PI77 547 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 SUN3Q8TAQ9 357 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 VMP1Q96GC9 406 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 DPYSL5Q9BPU6 564 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 SLC17A9Q9BYT1 436 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 NUDT4Q9NZJ9 180 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 RAB21Q9UL25 225 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 USP3Q9Y6I4 520 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 H0Y3Z8 333 aa9.15□□□□□ -0.94
PTPRE-202ENST00000306042 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms