RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 NIPSNAP2O75323 286 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 UFM1P61960 85 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 ERVK-8P63133 956 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX54-201ENST00000306014 RBFAQ8N0V3 343 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 C2CD4AQ8NCU7 369 aaPredicted RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 ELMO1Q92556 727 aa13.16□□□□□ -0.3
DDX54-201ENST00000306014 C2orf49Q9BVC5 232 aaPredicted RBP13.16□□□□□ -0.3
DDX54-201ENST00000306014 ENPP3O14638 875 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 ECI2O75521 394 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 TFPTP0C1Z6 253 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 TACR2P21452 398 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SERPINA4P29622 427 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 GHRHRQ02643 423 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 RFTN1Q14699 578 aaPredicted RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 AHSA2Q719I0 299 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 PNPLA1Q8N8W4 532 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 LAMB1P07942 1786 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 DDX60LQ5H9U9 1706 aaKnown RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 TCRBV5S1A1TA0A578 114 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 FAM220BPB1ANY3 271 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 TBL1XO60907 577 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 PFKMP08237 780 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SLC16A1P53985 500 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 IL10RBQ08334 325 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 GTF2H2Q13888 395 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 GTF2H2CQ6P1K8 395 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SLC2A7Q6PXP3 512 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 CILP2Q8IUL8 1156 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SLC13A3Q8WWT9 602 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 NELL1Q92832 810 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 TMBIM1Q969X1 311 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 ZNF696Q9H7X3 374 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 PTGDR2Q9Y5Y4 395 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 FAM234BA2RU67 622 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 CDC7O00311 574 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 STT3AP46977 705 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 FLT3LGP49771 235 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 ATN1P54259 1190 aaPredicted RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 SOX4Q06945 474 aaPredicted RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 HID1Q8IV36 788 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 ISOC1Q96CN7 298 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SLC25A13Q9UJS0 675 aa13.15□□□□□ -0.3
DDX54-201ENST00000306014 SAMD4AQ9UPU9 718 aaKnown RBP13.15□□□□□ -0.3
DDX54-201ENST00000306014 CXCR6O00574 342 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 GRID2O43424 1007 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 RGS10O43665 173 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 LRG1P02750 347 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
DDX54-201ENST00000306014 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
DDX54-201ENST00000306014 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 P2RY8Q86VZ1 359 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 UBASH3BQ8TF42 649 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 CDKN2AIPNLQ96HQ2 116 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 TMEM209Q96SK2 561 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 CIPCQ9C0C6 399 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 A0A1W2PP18 115 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 NDUFS2O75306 463 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 KCNE1P15382 129 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 ZNF182P17025 639 aaPredicted RBP13.14□□□□□ -0.31
DDX54-201ENST00000306014 EDNRBP24530 442 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 MAGEA6P43360 314 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 EEFSECP57772 596 aaKnown RBP13.14□□□□□ -0.31
DDX54-201ENST00000306014 DNAJB13P59910 316 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 PHKG1Q16816 387 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 TIMM50Q3ZCQ8 353 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 ZNF678Q5SXM1 525 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 CYP4Z1Q86W10 505 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 LIX1Q8N485 282 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 PROX1Q92786 737 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 MYDGFQ969H8 173 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 NSMCE3Q96MG7 304 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 STK16O75716 305 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 HPCAL1P37235 193 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 EPHB3P54753 998 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 MED22Q15528 200 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 TAZQ16635 292 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 UGT2A3Q6UWM9 527 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 ZC3H7AQ8IWR0 971 aaKnown RBP13.14□□□□□ -0.31
DDX54-201ENST00000306014 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 PDPRQ8NCN5 879 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 RNF208Q9H0X6 261 aa13.14□□□□□ -0.31
DDX54-201ENST00000306014 H3BNH8 94 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 hCG_2039718K7EN88 272 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 COL6A1P12109 1028 aa13.13□□□□□ -0.31
DDX54-201ENST00000306014 GLDCP23378 1020 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms