RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 KCTD11Q693B1 232 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 WDR74Q6RFH5 385 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 WASH2PQ6VEQ5 465 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 C11orf96Q7Z7L8 435 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 TRIM48Q8IWZ4 208 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 RASGEF1AQ8N9B8 481 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 RCBTB1Q8NDN9 531 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 FCRL3Q96P31 734 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 UCK1Q9HA47 277 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 WASH6PQ9NQA3 447 aa26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 DNMT3AQ9Y6K1 912 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-201ENST00000304494 AGRPO00253 132 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 SRP72O76094 671 aaKnown RBP26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 THRAP10827 490 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 AKT1P31749 480 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 CFHR1Q03591 330 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 SEPT7Q16181 437 aaKnown RBP26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 KIF26BQ2KJY2 2108 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 TMEM164Q5U3C3 297 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 AGAP9Q5VTM2 703 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 ABRAXAS1Q6UWZ7 409 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 AMZ2Q86W34 360 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 SLC13A5Q86YT5 568 aaPredicted RBP26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 RTP4Q96DX8 246 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 ZNF514Q96K75 400 aaPredicted RBP26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 B3GNT4Q9C0J1 378 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 ASB8Q9H765 288 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 LZTFL1Q9NQ48 299 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 FKBPLQ9UIM3 349 aa26.01■■□□□ 1.75
CDKN2A-201ENST00000304494 LILRA5A6NI73 299 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 LIASO43766 372 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 VIPP01282 170 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 MSH3P20585 1137 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 CSTF2P33240 577 aaKnown RBP eCLIP26■■□□□ 1.75
CDKN2A-201ENST00000304494 ZNF140P52738 457 aaPredicted RBP26■■□□□ 1.75
CDKN2A-201ENST00000304494 MAPK10P53779 464 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 LONRF2Q1L5Z9 754 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 AGBL5Q8NDL9 886 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 ATG4AQ8WYN0 398 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 POT1Q9NUX5 634 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 SCHIP1Q9P0W5 487 aaPredicted RBP26■■□□□ 1.75
CDKN2A-201ENST00000304494 KCTD3Q9Y597 815 aa26■■□□□ 1.75
CDKN2A-201ENST00000304494 AP2A1O95782 977 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 RPL10P27635 214 aaKnown RBP25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 HALP42357 657 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 CXADRP78310 365 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 DMPKQ09013 629 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 TMEM220Q6QAJ8 160 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 GPR155Q7Z3F1 870 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 RBM12BQ8IXT5 1001 aaKnown RBP25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 NCSTNQ92542 709 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 ULK4Q96C45 1275 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 TMEM9Q9P0T7 183 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 PDP2Q9P2J9 529 aa25.99■■□□□ 1.75
CDKN2A-201ENST00000304494 ZNF106Q9H2Y7 1883 aaKnown RBP25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 PRAMEF33A0A0G2JMD5 474 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 KLHL33A6NCF5 533 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 OR2AG2A6NM03 316 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 PRAMEF10O60809 474 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 POP7O75817 140 aaKnown RBP25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 BRAFP15056 766 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 MPSTP25325 297 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 CA5AP35218 305 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 ETV5P41161 510 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 SLC19A1P41440 591 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 MAPK9P45984 424 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 CTSCP53634 463 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 DRG2P55039 364 aaKnown RBP25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 XIAPP98170 497 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 CLN3Q13286 438 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 OASLQ15646 514 aaKnown RBP25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 LINC00523Q86TU6 105 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 OR13C4Q8NGS5 318 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 USP7Q93009 1102 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 ZNF624Q9P2J8 865 aaPredicted RBP25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 CRLS1Q9UJA2 301 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 ZNF148Q9UQR1 794 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 SSUH2Q9Y2M2 353 aa25.98■■□□□ 1.75
CDKN2A-201ENST00000304494 ERI2A8K979 691 aaKnown RBP25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 LDB2O43679 373 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 RALBP11234 206 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 CCL4P13236 92 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 ITGALP20701 1170 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 CD82P27701 267 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 TMEM26Q6ZUK4 368 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 TRIM58Q8NG06 486 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 CXorf40BQ96DE9 158 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 TBC1D10AQ9BXI6 508 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 ZFYVE26Q68DK2 2539 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 LOC400499M0QZD8 3231 aa25.97■■□□□ 1.75
CDKN2A-201ENST00000304494 AGAP14A8MT82 685 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 LIPCP11150 499 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 CCZ1BP86790 482 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 CCZ1P86791 482 aaPredicted RBP25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 TMPRSS15P98073 1019 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 FNBP1LQ5T0N5 605 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 SNX20Q7Z614 316 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 PLXDC1Q8IUK5 500 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 HEXDCQ8WVB3 486 aa25.96■■□□□ 1.75
CDKN2A-201ENST00000304494 DCUN1D1Q96GG9 259 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms