RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 MZT2BQ6NZ67 158 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 KBTBD2Q8IY47 623 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 XKRYO14609 159 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 DRD4P21917 467 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 BEND5Q7L4P6 421 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 BRI3BPQ8WY22 251 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 C12orf66Q96MD2 445 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TRNT1Q96Q11 434 aaKnown RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 RNF225M0QZC1 329 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 FSHRP23945 695 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 ASPAP45381 313 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 CCR3P51677 355 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TLE2Q04725 743 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 ZNF460Q14592 562 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 PDK3Q15120 406 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 AMZ1Q400G9 498 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TSTD2Q5T7W7 516 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 PRR23BQ6ZRT6 265 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TCF12Q99081 682 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 HMG20AQ9NP66 347 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 TMEM138Q9NPI0 162 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 CRNNQ9UBG3 495 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-201ENST00000293441 MAGEB3O15480 346 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 COL6A2P12110 1019 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 CCL5P13501 91 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 JAM2P57087 298 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 ZBTB6Q15916 424 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 IL36AQ9UHA7 158 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
SHANK1-201ENST00000293441 MAP2K7O14733 419 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 CLCQ05315 142 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 MTX3Q5HYI7 312 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 HMGB4Q8WW32 186 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 PRKCGP05129 697 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 GPD2P43304 727 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 DGKEP52429 567 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 CHIT1Q13231 466 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 SUZ12Q15022 739 aaKnown RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 IL23RQ5VWK5 629 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 DAW1Q8N136 415 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 SLC35C2Q9NQQ7 365 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ENTPD5O75356 428 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ZBTB11O95625 1053 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 GDI1P31150 447 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 MTHFRP42898 656 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 CTSOP43234 321 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ARSIQ5FYB1 569 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 FCRL4Q96PJ5 515 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 HOPXQ9BPY8 73 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 SDCBP2Q9H190 292 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 CFIP05156 583 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 IL12BP29460 328 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ANKRD22Q5VYY1 191 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 PDCD10Q9BUL8 212 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 TRPS1Q9UHF7 1281 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 PRPF19Q9UMS4 504 aaKnown RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 FAM86C2PA6NEL3 165 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 C2CD4BA6NLJ0 364 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 GNSP15586 552 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ACAP2Q15057 778 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 IRF2BP1Q8IU81 584 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 SPPL2CQ8IUH8 684 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 TDRD1Q9BXT4 1180 aaKnown RBP17.12■□□□□ 0.33
SHANK1-201ENST00000293441 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
SHANK1-201ENST00000293441 TIPRLO75663 272 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 LAMP2P13473 410 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 ITGADQ13349 1161 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TAF1AQ15573 450 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 RELTQ969Z4 430 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TRAFD1O14545 582 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TBX18O95935 607 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 PTDSS1P48651 473 aaKnown RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 EIF2B2P49770 351 aaKnown RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 PGDP52209 483 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 AGAP11Q8TF27 550 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 AZIN2Q96A70 460 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 COPS7AQ9UBW8 275 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 SLC13A2Q13183 592 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 RFTN2Q52LD8 501 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 DNAJB7Q7Z6W7 309 aaPredicted RBP17.11■□□□□ 0.33
SHANK1-201ENST00000293441 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 CPNE9Q8IYJ1 553 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 LIX1Q8N485 282 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 CYB5D2Q8WUJ1 264 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 HBEGFQ99075 208 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 IKZF2Q9UKS7 526 aa17.11■□□□□ 0.33
SHANK1-201ENST00000293441 RICTORQ6R327 1708 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms