RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PTGS2P35354 604 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 AFF1P51825 1210 aaKnown RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 ZNF792Q3KQV3 632 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 C5orf22Q49AR2 442 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 TIFABQ6ZNK6 161 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 RASSF6Q6ZTQ3 369 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 AHI1Q8N157 1196 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 CANT1Q8WVQ1 401 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 TOP1MTQ969P6 601 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 OPTCQ9UBM4 332 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 CNTN5O94779 1100 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 DHRS4L1P0CG22 281 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 NUP62P37198 522 aaPredicted RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 STX4Q12846 297 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 PRKG2Q13237 762 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 DPYSQ14117 519 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 MAPKAPK3Q16644 382 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 C14orf80Q86SX3 495 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 ERI1Q8IV48 349 aaKnown RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 TXNDC5Q8NBS9 432 aaKnown RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 NTAN1Q96AB6 310 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 MED8Q96G25 268 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 CDK15Q96Q40 435 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 TRPC4Q9UBN4 977 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 PADI4Q9UM07 663 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 SAMHD1Q9Y3Z3 626 aaKnown RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 PRKD3O94806 890 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 YAP1P46937 504 aaKnown RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 MACC1Q6ZN28 852 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNA7Q96RP8 456 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 GPR22Q99680 433 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNH4Q9UQ05 1017 aa12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 POLR3HQ9Y535 204 aaPredicted RBP12.44□□□□□ -0.42
SLC6A1-201ENST00000287766 RBM47A0AV96 593 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CCDC162PA2VCL2 907 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 NDUFB5O43674 189 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 NOS1APO75052 506 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 LPOP22079 712 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 OR1D2P34982 312 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 POLD2P49005 469 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CCL23P55773 120 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 PURAQ00577 322 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 AP5B1Q2VPB7 878 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ARMC12Q5T9G4 340 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 FAM131AQ6UXB0 335 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 KRT78Q8N1N4 520 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ACVR1CQ8NER5 493 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 SOCS4Q8WXH5 440 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ADI1Q9BV57 179 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 C12orf4Q9NQ89 552 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 SMPD3Q9NY59 655 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 TCRBV5S1A1TA0A578 114 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 H7C4K7 107 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 SLC22A3O75751 556 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 IFNA14P01570 189 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 FGF1P05230 155 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ACVRL1P37023 503 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 RPS24P62847 133 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CYP4F8P98187 520 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 BNC1Q01954 994 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CNTN1Q12860 1018 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 RFX4Q33E94 735 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 SULT1C3Q6IMI6 304 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ANKS3Q6ZW76 656 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 THAP5Q7Z6K1 395 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CEP97Q8IW35 865 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 NAT16Q8N8M0 369 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 VPS35Q96QK1 796 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 FCRL5Q96RD9 977 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 FEM1AQ9BSK4 669 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 LEF1Q9UJU2 399 aaPredicted RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 OR4F21O95013 312 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 KCNH1O95259 989 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 S100A6P06703 90 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 DDX5P17844 614 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CLCQ05315 142 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CACUL1Q86Y37 369 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CPNE9Q8IYJ1 553 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 NKAPQ8N5F7 415 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 BTN2A3PQ96KV6 586 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CHCHD6Q9BRQ6 235 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 CIPCQ9C0C6 399 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ALG2Q9H553 416 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ADPRHL2Q9NX46 363 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 EIF2B4Q9UI10 523 aaKnown RBP12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 ERGIC3Q9Y282 383 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 A0A1W2PPW3 197 aa12.43□□□□□ -0.42
SLC6A1-201ENST00000287766 IQCF5A8MTL0 148 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms