RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 JADE3Q92613 823 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 GATA6Q92908 595 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 PPP2R3CQ969Q6 453 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 BOCQ9BWV1 1114 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 DLGAP2Q9P1A6 1054 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 NPEPPSL1A6NEC2 478 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 EIF4E1BA6NMX2 242 aaKnown RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 UBFD1O14562 309 aaKnown RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 SNX2O60749 519 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 SLC25A14O95258 325 aaPredicted RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 SIX3O95343 332 aaPredicted RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 JUNP05412 331 aaKnown RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 THRAP10827 490 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 BMP1P13497 986 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 DGKAP23743 735 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 SPINT3P49223 89 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 INHBCP55103 352 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 BTKQ06187 659 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 RPS27LQ71UM5 84 aaKnown RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 ADAMTSL2Q86TH1 951 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 SORCS1Q8WY21 1168 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 FGF13Q92913 245 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 COPS8Q99627 209 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 LATS2Q9NRM7 1088 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 RAD18Q9NS91 495 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 THG1LQ9NWX6 298 aaKnown RBP15.13■□□□□ 0.01
SF3B4-201ENST00000271628 ZDHHC3Q9NYG2 299 aa15.13■□□□□ 0.01
SF3B4-201ENST00000271628 TSPAN11A1L157 253 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 RGSL1A5PLK6 1076 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 SDHDO14521 159 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 TULP3O75386 442 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 EEF1DP29692 281 aaKnown RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 MAGEA10P43363 369 aaPredicted RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 IRX1P78414 480 aaPredicted RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 SLC25A3Q00325 362 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 LCP2Q13094 533 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 ARSIQ5FYB1 569 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 PGM2L1Q6PCE3 622 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 ETFBKMTQ8IXQ9 262 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 PHTF2Q8N3S3 785 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 RP9Q8TA86 221 aaKnown RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 UCMAQ8WVF2 138 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 RSPRY1Q96DX4 576 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 PBX4Q9BYU1 374 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 S100A14Q9HCY8 104 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 SPATS2LQ9NUQ6 558 aaKnown RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 ELOVL2Q9NXB9 296 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 DKK3Q9UBP4 350 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 IKZF3Q9UKT9 509 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 FIS1Q9Y3D6 152 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 CDK14O94921 469 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 COX4I1P13073 169 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 VIPR1P32241 457 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 PBX2P40425 430 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 CDH13P55290 713 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 SH3BP2P78314 561 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 CLCQ05315 142 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 TGFBIQ15582 683 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 TTLL9Q3SXZ7 439 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 ZNF805Q5CZA5 627 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 MYO1HQ8N1T3 1032 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 CLDN19Q8N6F1 224 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
SF3B4-201ENST00000271628 TRPV4Q9HBA0 871 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 MID1IP1Q9NPA3 183 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 NUDT4Q9NZJ9 180 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 KLHL42Q9P2K6 505 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 DEC1Q9P2X7 70 aa15.12■□□□□ 0.01
SF3B4-201ENST00000271628 LOC100653049A0A140TA62 436 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 KRT34O76011 436 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 TRIM16O95361 564 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 BAG2O95816 211 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 MLYCDO95822 493 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 RPS17P08708 135 aaKnown RBP15.11■□□□□ 0.01
SF3B4-201ENST00000271628 C1SP09871 688 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 XPAP23025 273 aaPredicted RBP15.11■□□□□ 0.01
SF3B4-201ENST00000271628 SEMG2Q02383 582 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 PDGFRLQ15198 375 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 ATP13A5Q4VNC0 1218 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 PPP2R2DQ66LE6 453 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 OR52E8Q6IFG1 317 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 FRA10AC1Q70Z53 315 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 POU5F2Q8N7G0 328 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 MYLIPQ8WY64 445 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 ECSITQ9BQ95 431 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 RTKNQ9BST9 563 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 VCX3BQ9H321 246 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 ZNF385DQ9H6B1 395 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 CD274Q9NZQ7 290 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 C2orf16Q68DN1 1984 aa15.11■□□□□ 0.01
SF3B4-201ENST00000271628 HEPACAM2A8MVW5 462 aa15.1■□□□□ 0.01
SF3B4-201ENST00000271628 MEI4A8MW99 385 aa15.1■□□□□ 0.01
SF3B4-201ENST00000271628 UPK3BL1B0FP48 263 aa15.1■□□□□ 0.01
SF3B4-201ENST00000271628 UPK3BL2E5RIL1 263 aa15.1■□□□□ 0.01
SF3B4-201ENST00000271628 AZIN1O14977 448 aa15.1■□□□□ 0.01
SF3B4-201ENST00000271628 OR56A5P0C7T3 313 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms