RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PID1Q7Z2X4 250 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 FAM129CQ86XR2 697 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 ZNF567Q8N184 647 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 TTC30BQ8N4P2 665 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 ZSCAN1Q8NBB4 408 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 AVL9Q8NBF6 648 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 HTR3CQ8WXA8 447 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 JPH3Q8WXH2 748 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 KRT35Q92764 455 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 EXTL1Q92935 676 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 OXNAD1Q96HP4 312 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 MRGPRX2Q96LB1 330 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 VPS35Q96QK1 796 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 TIMM29Q9BSF4 260 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 HEMGNQ9BXL5 484 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 OSGEPL1Q9H4B0 414 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 EPB41L1Q9H4G0 881 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 BPIFA1Q9NP55 256 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 WASH6PQ9NQA3 447 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 FBXO8Q9NRD0 319 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 IL17CQ9P0M4 197 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 KLHL8Q9P2G9 620 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 ZNF624Q9P2J8 865 aaPredicted RBP9.58□□□□□ -0.88
VPS41-201ENST00000265745 TRHDEQ9UKU6 1024 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS41-201ENST00000265745 ATMQ13315 3056 aa9.58□□□□□ -0.88
VPS41-201ENST00000265745 LRP4O75096 1905 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 PIEZO2Q9H5I5 2752 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 LILRA5A6NI73 299 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 A8MU76 341 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 HACD1B0YJ81 288 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 BRAFP15056 766 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 RPL10P27635 214 aaKnown RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 PPM1FP49593 454 aaPredicted RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 RAB15P59190 212 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 CYP4F2P78329 520 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 XRCC4Q13426 336 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 SLC1A5Q15758 541 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 CHRNA6Q15825 494 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 INSCQ1MX18 579 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 AGAP9Q5VTM2 703 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 ZDHHC20Q5W0Z9 365 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 ANKS6Q68DC2 871 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 ABRAXAS1Q6UWZ7 409 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 TMEM26Q6ZUK4 368 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 C11orf96Q7Z7L8 435 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 LRRTM4Q86VH4 590 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 PLXDC1Q8IUK5 500 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 SLC25A41Q8N5S1 370 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 BRSK1Q8TDC3 778 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 HAUS1Q96CS2 278 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 RTP4Q96DX8 246 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 RBM41Q96IZ5 413 aaKnown RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 QKIQ96PU8 341 aaKnown RBP eCLIP9.57□□□□□ -0.88
VPS41-201ENST00000265745 TEFMQ96QE5 360 aaKnown RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 CTRCQ99895 268 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 SLC40A1Q9NP59 571 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.57□□□□□ -0.88
VPS41-201ENST00000265745 OGFRQ9NZT2 677 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 HACD3Q9P035 362 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 PILRAQ9UKJ1 303 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 EFR3BQ9Y2G0 817 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 DNAJC16Q9Y2G8 782 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 EPN1Q9Y6I3 576 aaPredicted RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 SLC30A1Q9Y6M5 507 aa9.57□□□□□ -0.88
VPS41-201ENST00000265745 GCN1Q92616 2671 aaKnown RBP9.57□□□□□ -0.88
VPS41-201ENST00000265745 SPTA1P02549 2419 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 ARHGEF17Q96PE2 2063 aaPredicted RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 PDZK1P1A8MUH7 402 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 F5H423 210 aaPredicted RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 APOC4-APOC2K7ER74 178 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 UGT1A9O60656 530 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 UBXN7O94888 489 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 AGTP01019 485 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 VIPP01282 170 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 APOC2P02655 101 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 C9P02748 559 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 ANKRD34CP0C6C1 535 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 UGT1A6P19224 532 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 HLA-DPA1P20036 260 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 IDSP22304 550 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 UGT1A1P22309 533 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 UGT1A4P22310 534 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 CA5AP35218 305 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 CYLC1P35663 651 aaPredicted RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 TNNT3P45378 269 aaPredicted RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 MAPK9P45984 424 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 DRG2P55039 364 aaKnown RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 MPP3Q13368 585 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 CLCA4Q14CN2 919 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 SEPT7Q16181 437 aaKnown RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 TBR1Q16650 682 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 PLA2G4EQ3MJ16 856 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 FAM151BQ6UXP7 276 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 RANBP10Q6VN20 620 aa9.56□□□□□ -0.88
VPS41-201ENST00000265745 DNAJC14Q6Y2X3 702 aaPredicted RBP9.56□□□□□ -0.88
VPS41-201ENST00000265745 DAAM2Q86T65 1068 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms