RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RNF6Q9Y252 685 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CRYL1Q9Y2S2 319 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ASCC3Q8N3C0 2202 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CICQ96RK0 1608 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 NFICP08651 508 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 GSK3BP49841 420 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 PHC3Q8NDX5 983 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SELENOMQ8WWX9 145 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 C8orf48Q96LL4 319 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 COL21A1Q96P44 957 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 DLGAP1O14490 977 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CHRNA1P02708 482 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ATXN8OSP0DMR3 200 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CYP4F3Q08477 520 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 LINC00471Q8N535 108 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 TFB2MQ9H5Q4 396 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF132P52740 706 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF177Q13360 481 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 NDUFA9Q16795 377 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 TMEM214Q6NUQ4 689 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 KRT77Q7Z794 578 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CARM1Q86X55 608 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF567Q8N184 647 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 OR4L1Q8NH43 312 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CORO1BQ9BR76 489 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 RPL36Q9Y3U8 105 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 CLTBP09497 229 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SKP1P63208 163 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 VRTNQ9H8Y1 702 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 AJAP1Q9UKB5 411 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 RBMX2Q9Y388 322 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 PCDHB1Q9Y5F3 818 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ACOX3O15254 700 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 EEDO75530 441 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 PRAMEF1O95521 474 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 LRRC71Q8N4P6 559 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 GPR88Q9GZN0 384 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 MOCS1Q9NZB8 636 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SPATA31A5Q5VU36 1347 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SPATA31A7Q8IWB4 1347 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 THP07101 528 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 GSTM1P09488 218 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 FPR1P21462 350 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 MYL9P24844 172 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 SLC5A2P31639 672 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ARL4DP49703 201 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 RPL38P63173 70 aaKnown RBP11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ORC1Q13415 861 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 OR13J1Q8NGT2 312 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 PPP1R16BQ96T49 567 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 MAGIXQ9H6Y5 334 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF451Q9Y4E5 1061 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 STON1Q9Y6Q2 735 aa11.57□□□□□ -0.56
DNMT3A-201ENST00000264709 J3QRK9 145 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 CXCR6O00574 342 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 ECDO95905 644 aaPredicted RBP11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 IQCCQ4KMZ1 466 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 FAAH2Q6GMR7 532 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 RASSF6Q6ZTQ3 369 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 OR52L1Q8NGH7 329 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 FBXL8Q96CD0 374 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 OR52B2Q96RD2 323 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 MRPL39Q9NYK5 338 aaKnown RBP11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 DTLQ9NZJ0 730 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 A3GALT2U3KPV4 340 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 EGFRP00533 1210 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 RFC2P35250 354 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 CTBP1Q13363 440 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 GRM3Q14832 879 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 C10orf120Q5SQS8 335 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 SLITRK4Q8IW52 837 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF557Q8N988 423 aaPredicted RBP11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 TBCDQ9BTW9 1192 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 GTPBP2Q9BX10 602 aaKnown RBP11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 MFSD11O43934 449 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 PLOD3O60568 738 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 LINC00032P0C843 101 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 PTGES3Q15185 160 aaKnown RBP11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 LDLRAP1Q5SW96 308 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 RBFAQ8N0V3 343 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 SEZ6LQ9BYH1 1024 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 CEP41Q9BYV8 373 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 TMEM39BQ9GZU3 492 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 TKTL2Q9H0I9 626 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 CMTM6Q9NX76 183 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 AASSQ9UDR5 926 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 STYXL1Q9Y6J8 313 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 ROBO1Q9Y6N7 1651 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 CCNDBP1O95273 360 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 ZNF24P17028 368 aa11.56□□□□□ -0.56
DNMT3A-201ENST00000264709 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms