RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 DDX3YO15523 660 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 NR2F1P10589 423 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ASPAP45381 313 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ARFIP1P53367 373 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HERVK_113P63132 956 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ARHGAP1Q07960 439 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TAF10Q12962 218 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SWT1Q5T5J6 900 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HECTD2Q5U5R9 776 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SLC9A4Q6AI14 798 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 UNQ6126/PRO20091Q6UXV3 157 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KBTBD6Q86V97 674 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZZZ3Q8IYH5 903 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA2013Q8IYS2 634 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DSELQ8IZU8 1212 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TRPM4Q8TD43 1214 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SMG7Q92540 1137 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CLPTM1LQ96KA5 538 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 BCL7BQ9BQE9 202 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ERVK-6Q9BXR3 956 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MVB12BQ9H7P6 319 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RIIAD1A6NNX1 92 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DFNA5O60443 496 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LRCH4O75427 683 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 IGHEP01854 428 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GSTT2BP0CG30 244 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GOT1P17174 413 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DRD4P21917 467 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 NME5P56597 212 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R50P59544 299 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GPR17Q13304 367 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF846Q147U1 533 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KCNK18Q7Z418 384 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF440Q8IYI8 595 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HCAR2Q8TDS4 363 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 HDAC10Q969S8 669 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LRRC46Q96FV0 321 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 AGAP2Q99490 1192 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TBCDQ9BTW9 1192 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MYLK2Q9H1R3 596 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MINDY3Q9H8M7 445 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DDX28Q9NUL7 540 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MOCS1Q9NZB8 636 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 COL16A1Q07092 1604 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 LOC100653049A0A140TA62 436 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PRR5-ARHGAP8B1AHC4 643 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CPSF4O95639 269 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GABRR2P28476 465 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CORO1AP31146 461 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CASRP41180 1078 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GAS6Q14393 721 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PUS10Q3MIT2 529 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CCDC81Q6ZN84 652 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TTC7BQ86TV6 843 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZC3HC1Q86WB0 502 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DENND6AQ8IWF6 608 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GALNT4Q8N4A0 578 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RHEBL1Q8TAI7 183 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PHOSPHO2Q8TCD6 241 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FAM120CQ9NX05 1096 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FAM92AA1XBS5 289 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ANXA8P13928 327 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SSTR1P30872 391 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 POLR2JP52435 117 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PTPN20Q4JDL3 420 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CUZD1Q86UP6 607 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CENPNQ96H22 339 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KCTD15Q96SI1 283 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DERL2Q9GZP9 239 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GPN1Q9HCN4 374 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHGB6Q9Y5F9 930 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DNMT3AQ9Y6K1 912 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 YDJCA8MPS7 323 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TEX46H3BTG2 121 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 WNT9AO14904 365 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 B3GALT2O43825 422 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PRKAR1AP10644 381 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ACTR1BP42025 376 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 RTL4Q6ZR62 310 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZC3H7AQ8IWR0 971 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ZBTB45Q96K62 511 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GPATCH1Q9BRR8 931 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DENND2DQ9H6A0 471 aaPredicted RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 PCDHGA4Q9Y5G9 962 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 C9IYK1 514 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TMEM189-UBE2V1I3L0A0 370 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 AGPSO00116 658 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 GTPBP1O00178 669 aaKnown RBP4.27□□□□□ -1.73
VPS13C-202ENST00000261517 KCNK1O00180 336 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 FPGTO14772 594 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 MAGEB3O15480 346 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 DCXO43602 365 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 ASNA1O43681 348 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 UGDHO60701 494 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CYP7B1O75881 506 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 SLITRK5O94991 958 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TRBC1P01850 177 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 CAPN1P07384 714 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 OR1D2P34982 312 aa4.27□□□□□ -1.73
VPS13C-202ENST00000261517 TAS2R43P59537 309 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms