RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 BCL7AQ4VC05 210 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 PCID2Q5JVF3 399 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 TSTD2Q5T7W7 516 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 AGAP9Q5VTM2 703 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 LSMEM2Q8N112 164 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 SLC38A3Q99624 504 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 DPYSL5Q9BPU6 564 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 IL22Q9GZX6 179 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 PRDM8Q9NQV8 689 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 BFARQ9NZS9 450 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 TCAF1Q9Y4C2 921 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 PCDHB1Q9Y5F3 818 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 AK5Q9Y6K8 562 aa23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 MAP1BP46821 2468 aaKnown RBP23.95■■□□□ 1.42
SDF2L1-201ENST00000248958 UNC13CQ8NB66 2214 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 TRBV23OR9-2A0A075B6M9 112 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 PDZK1P1A8MUH7 402 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CCL22O00626 93 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 ZNF185O15231 689 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 B4GAT1O43505 415 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CPNE6O95741 557 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 XRCC1P18887 633 aaPredicted RBP23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 ACRV1P26436 265 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 ALDH4A1P30038 563 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CCKBRP32239 447 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 MAGEA6P43360 314 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 GPLD1P80108 840 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CYP4F3Q08477 520 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 GPS1Q13098 491 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 ST3GAL2Q16842 350 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CCDC38Q502W7 563 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 FNBP1LQ5T0N5 605 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 LRRC8BQ6P9F7 803 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 LINC00615Q96LM1 132 aaPredicted RBP23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 FAM96AQ9H5X1 160 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 KCNK4Q9NYG8 393 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CPNE7Q9UBL6 633 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 SAR1BQ9Y6B6 198 aa23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.94■■□□□ 1.42
SDF2L1-201ENST00000248958 CTAGE9A4FU28 777 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 ATP1B2P14415 290 aaPredicted RBP23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 HALP42357 657 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 INHBCP55103 352 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 OR1D5P58170 312 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 ACVR1Q04771 509 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 EIF3IQ13347 325 aaKnown RBP23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 SQSTM1Q13501 440 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 TRIP13Q15645 432 aaPredicted RBP23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 ARMC3Q5W041 872 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 TAS2R42Q7RTR8 314 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 PIM3Q86V86 326 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 SERPINA9Q86WD7 417 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 MDM1Q8TC05 714 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 SGF29Q96ES7 293 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 LIN37Q96GY3 246 aaPredicted RBP23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 SGSM3Q96HU1 749 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 TTC1Q99614 292 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 STRADBQ9C0K7 418 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 UCK1Q9HA47 277 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 SMARCAL1Q9NZC9 954 aa23.93■■□□□ 1.42
SDF2L1-201ENST00000248958 IGLV3-16A0A075B6K0 115 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 MGAT4DA6NG13 374 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 LSSP48449 732 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 PRLHRP49683 370 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 PDX1P52945 283 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 EPHA4P54764 986 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 SESN2P58004 480 aaPredicted RBP23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 ITIH4Q14624 930 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 KCNJ11Q14654 390 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 MAP9Q49MG5 647 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 LYPLAL1Q5VWZ2 237 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 AFTPHQ6ULP2 937 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 DET1Q7L5Y6 550 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 PROSER1Q86XN7 944 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 RBM12BQ8IXT5 1001 aaKnown RBP23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 BEND7Q8N7W2 519 aaPredicted RBP23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 OR13J1Q8NGT2 312 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 ATXN7L3BQ96GX2 97 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 EPB41L1Q9H4G0 881 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 VPS37BQ9H9H4 285 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 POLR1BQ9H9Y6 1135 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 POT1Q9NUX5 634 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 RNF14Q9UBS8 474 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 ZMIZ1Q9ULJ6 1067 aa23.92■■□□□ 1.42
SDF2L1-201ENST00000248958 IGHV1OR21-1A0A087WYE8 117 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 CCDC187A0A096LP49 1063 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 C17orf113A0A1B0GUU1 675 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 CCDC78A2IDD5 438 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 QSOX1O00391 747 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 VIPP01282 170 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 GSTM1P09488 218 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 VPS41P49754 854 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 ARSDP51689 593 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 UBE2IP63279 158 aaKnown RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 PRAMEP78395 509 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 GSTM4Q03013 218 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 ZFP36L1Q07352 338 aaKnown RBP23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 AMZ1Q400G9 498 aa23.91■■□□□ 1.42
SDF2L1-201ENST00000248958 TRIM48Q8IWZ4 208 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms