RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 UROSP10746 265 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 BMP2P12643 396 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 CHRM3P20309 590 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 CAPN3P20807 821 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 TLE2Q04725 743 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 SPATS1Q496A3 300 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 TAS2R42Q7RTR8 314 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 DDX53Q86TM3 631 aaKnown RBP21.67■■□□□ 1.06
RNF39-201ENST00000244360 TSPEARQ8WU66 669 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 GPR63Q9BZJ6 419 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 TIMMDC1Q9NPL8 285 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 DHRS7Q9Y394 339 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 GPR45Q9Y5Y3 372 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 OBSL1O75147 1896 aa21.67■■□□□ 1.06
RNF39-201ENST00000244360 E5RI56 91 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 E2F3O00716 465 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 PRMT5O14744 637 aaPredicted RBP21.66■■□□□ 1.06
RNF39-201ENST00000244360 PRDX3P30048 256 aaKnown RBP21.66■■□□□ 1.06
RNF39-201ENST00000244360 SLC7A2P52569 658 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 GRIK2Q13002 908 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 FBXO48Q5FWF7 155 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 MTX3Q5HYI7 312 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 TXNDC8Q6A555 127 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 LAYNQ6UX15 382 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 OR56A4Q8NGH8 313 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.66■■□□□ 1.06
RNF39-201ENST00000244360 PLEKHG4BQ96PX9 1271 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 HGH1Q9BTY7 390 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 C2orf49Q9BVC5 232 aaPredicted RBP21.66■■□□□ 1.06
RNF39-201ENST00000244360 NUDT4Q9NZJ9 180 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 MYRFQ9Y2G1 1151 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 FNDC3AQ9Y2H6 1198 aaKnown RBP21.66■■□□□ 1.06
RNF39-201ENST00000244360 RNF11Q9Y3C5 154 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 SLC30A1Q9Y6M5 507 aa21.66■■□□□ 1.06
RNF39-201ENST00000244360 A0A1B0GVG6 124 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 NCF1BA6NI72 391 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 AQP12BA6NM10 295 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 NCF1CA8MVU1 366 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 K7ERQ8 282 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 GAPDHSO14556 408 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 CRCPO75575 148 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 CSPG5O95196 566 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 NCF1P14598 390 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 RPS3P23396 243 aaKnown RBP eCLIP21.65■■□□□ 1.06
RNF39-201ENST00000244360 CSNK1DP48730 415 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 TUBA4AP68366 448 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 ECT2LQ008S8 904 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 TRIM60Q495X7 471 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 LRRC23Q53EV4 343 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 KRT80Q6KB66 452 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 ITIH5Q86UX2 942 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 AQP12AQ8IXF9 295 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 MINDY1Q8N5J2 469 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 ZNF382Q96SR6 550 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 CCT7Q99832 543 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 ANKRD60Q9BZ19 345 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 SPG21Q9NZD8 308 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 TBX21Q9UL17 535 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 FXYD1O00168 92 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 GPR39O43194 453 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 HTRA2O43464 458 aaPredicted RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 SNX2O60749 519 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 CTPS1P17812 591 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 BNIP2Q12982 314 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 RETSATQ6NUM9 610 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 PPP4R4Q6NUP7 873 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 BLOC1S3Q6QNY0 202 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 ERMP1Q7Z2K6 904 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 AMIGO2Q86SJ2 522 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 HM13Q8TCT9 377 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 AUTS2Q8WXX7 1259 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 PPWD1Q96BP3 646 aaKnown RBP21.65■■□□□ 1.06
RNF39-201ENST00000244360 SLC39A3Q9BRY0 314 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 TMEM79Q9BSE2 394 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 AIG1Q9NVV5 245 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 CD274Q9NZQ7 290 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 TIMM22Q9Y584 194 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 LTBP2Q14767 1821 aa21.65■■□□□ 1.06
RNF39-201ENST00000244360 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.64■■□□□ 1.06
RNF39-201ENST00000244360 ALPIP09923 528 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 SPATA31D3P0C874 917 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 LAG3P18627 525 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 INPP5AQ14642 412 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 TGFBIQ15582 683 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 HMBOX1Q6NT76 420 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 CYP2R1Q6VVX0 501 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 SPATA31D4Q6ZUB0 917 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 GPRIN3Q6ZVF9 776 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 CAMK1DQ8IU85 385 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 APCDD1Q8J025 514 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 TRIML2Q8N7C3 387 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 EIF2B4Q9UI10 523 aaKnown RBP21.64■■□□□ 1.06
RNF39-201ENST00000244360 ASB1Q9Y576 335 aa21.64■■□□□ 1.06
RNF39-201ENST00000244360 GOLGA8CPA6NN73 597 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 H3BNH8 94 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 HNRNPRO43390 633 aaKnown RBP21.64■■□□□ 1.05
RNF39-201ENST00000244360 CHEK2O96017 543 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
RNF39-201ENST00000244360 MAPK8P45983 427 aa21.64■■□□□ 1.05
RNF39-201ENST00000244360 NME5P56597 212 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms