RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DNMT3AQ9Y6K1 912 aaPredicted RBP11.14□□□□□ -0.63
SF3B6-201ENST00000233468 TDRD6O60522 2096 aaKnown RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 TRABD2BA6NFA1 517 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 FAM187AA6NFU0 413 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 OR5K4A6NMS3 321 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 QSOX1O00391 747 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 DNALI1O14645 258 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CHUKO15111 745 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 KALRNO60229 2985 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A9O60656 530 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 DNAJC6O75061 913 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 RFPL3O75679 317 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 URI1O94763 535 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 GP1BAP07359 652 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF8P17098 575 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A6P19224 532 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A1P22309 533 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A4P22310 534 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 ACP1P24666 158 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A3P35503 534 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A5P35504 534 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 ACTR1BP42025 376 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 GRIA1P42261 906 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CLCNKAP51800 687 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 ACTR1AP61163 376 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 XIAPP98170 497 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CTBSQ01459 385 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 MORF4L2Q15014 288 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CCDC38Q502W7 563 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 FASTKD1Q53R41 847 aaKnown RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 DNAJC21Q5F1R6 531 aaKnown RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 GPRC6AQ5T6X5 926 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CERS6Q6ZMG9 384 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 CHST15Q7LFX5 561 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 JAMLQ86YT9 394 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 TRAPPC5Q8IUR0 188 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 NXPE1Q8N323 547 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 OR6P1Q8NGX9 317 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 WDR48Q8TAF3 677 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 GABPB2Q8TAK5 448 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 KRT12Q99456 494 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 TIMM29Q9BSF4 260 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 STN1Q9H668 368 aaKnown RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A7Q9HAW7 530 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A10Q9HAW8 530 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 UGT1A8Q9HAW9 530 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 TAAR2Q9P1P5 351 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 GULP1Q9UBP9 304 aa11.13□□□□□ -0.63
SF3B6-201ENST00000233468 PNMA8BQ9ULN7 279 aaPredicted RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 OAS3Q9Y6K5 1087 aaKnown RBP11.13□□□□□ -0.63
SF3B6-201ENST00000233468 AGAP14A8MT82 685 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 AP2A2O94973 939 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 GSTM1P09488 218 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 GIMD1P0DJR0 217 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ACRV1P26436 265 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 MGAT1P26572 445 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 PTGIRP43119 386 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 TERF1P54274 439 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 GSTM4Q03013 218 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ACVR1Q04771 509 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 CALCOCO2Q13137 446 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ITIH4Q14624 930 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 PTPRCAPQ14761 206 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 INSCQ1MX18 579 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 IZUMO3Q5VZ72 239 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ZNF449Q6P9G9 518 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 OGFOD3Q6PK18 319 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SLC30A9Q6PML9 568 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 DHRS13Q6UX07 377 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SDCCAG8Q86SQ7 713 aaPredicted RBP11.12□□□□□ -0.63
SF3B6-201ENST00000233468 GALNT15Q8N3T1 639 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 BEND7Q8N7W2 519 aaPredicted RBP11.12□□□□□ -0.63
SF3B6-201ENST00000233468 NAT8LQ8N9F0 302 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 OR4L1Q8NH43 312 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 HDAC10Q969S8 669 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SNF8Q96H20 258 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SGSM3Q96HU1 749 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SERPINB12Q96P63 405 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 NAT9Q9BTE0 207 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 KIFC1Q9BW19 673 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ABCG4Q9H172 646 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ARFGAP3Q9NP61 516 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 ZDHHC3Q9NYG2 299 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 PADI4Q9UM07 663 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 UTP11Q9Y3A2 253 aaKnown RBP11.12□□□□□ -0.63
SF3B6-201ENST00000233468 MGAQ8IWI9 3026 aa11.12□□□□□ -0.63
SF3B6-201ENST00000233468 TRBV5-4A0A0C4DH59 114 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 TCRBV7S3A2A0A539 114 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 CPED1A4D0V7 1026 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 EME2A4GXA9 379 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 EFCAB8A8MWE9 144 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 B4DGG1 531 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 GAPDHSO14556 408 aaPredicted RBP11.11□□□□□ -0.63
SF3B6-201ENST00000233468 FANCGO15287 622 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 TTI1O43156 1089 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 MTX2O75431 263 aa11.11□□□□□ -0.63
SF3B6-201ENST00000233468 FUCA1P04066 466 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms