RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 OR2AG1Q9H205 316 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 P2RY12Q9H244 342 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 TXNDC16Q9P2K2 825 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 SLC24A2Q9UI40 661 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CORO1CQ9ULV4 474 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-213ENST00000642137 CRYL1Q9Y2S2 319 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM98Q9Y2Y6 226 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 PCDHGA5Q9Y5G8 931 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 COMMD10Q9Y6G5 202 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 GON4LQ3T8J9 2241 aa12.17□□□□□ -0.46
LINC00339-213ENST00000642137 EXOC1LA0A1B0GW35 172 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 POC1B-GALNT4F8VUJ3 575 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 H3BMM5 538 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 DNAJC6O75061 913 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 MTX2O75431 263 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 PIAS1O75925 651 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 EPN2O95208 641 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ESR1P03372 595 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 IVLP07476 585 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 OR56A5P0C7T3 313 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 PKMP14618 531 aaKnown RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF8P17098 575 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 AKT1P31749 480 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 POLD2P49005 469 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 EIF3BP55884 814 aaKnown RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 TPRG1LQ5T0D9 272 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 FBXO38Q6PIJ6 1188 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM220Q6QAJ8 160 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ADGRD1Q6QNK2 874 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 TRIM74Q86UV6 250 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ZC3HC1Q86WB0 502 aaKnown RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 SLC22A18ASQ8N1D0 253 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 RASGEF1AQ8N9B8 481 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ATOH1Q92858 354 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-213ENST00000642137 BIRC8Q96P09 236 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 RBBP8Q99708 897 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 DHRS4Q9BTZ2 278 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 ZNF180Q9UJW8 692 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 PSAT1Q9Y617 370 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 IKBKGQ9Y6K9 419 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 PRSS21Q9Y6M0 314 aa12.16□□□□□ -0.46
LINC00339-213ENST00000642137 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 UBA6A0AVT1 1052 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 GRID2O43424 1007 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SGTAO43765 313 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 KCNJ13O60928 360 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 TNFP01375 233 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 FUCA1P04066 466 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SHBGP04278 402 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 INHBAP08476 426 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 GSTM1P09488 218 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 CD9P21926 228 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 GCAP28676 217 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 FMO4P31512 558 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SERPINB9P50453 376 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 C21orf59P57076 290 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 NXPH1P58417 271 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SRP54P61011 504 aaKnown RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 GSTM4Q03013 218 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 EIF2B5Q13144 721 aaKnown RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 FZD2Q14332 565 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 EFTUD2Q15029 972 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 RASA2Q15283 850 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 BCL7AQ4VC05 210 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 LGSNQ5TDP6 509 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 LAIR1Q6GTX8 287 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SLC23A3Q6PIS1 610 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SPATS2Q86XZ4 545 aaKnown RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SUMF1Q8NBK3 374 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SGF29Q96ES7 293 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 CCDC97Q96F63 343 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 LINC00615Q96LM1 132 aaPredicted RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 PAFAH2Q99487 392 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 AARSD1Q9BTE6 412 aaKnown RBP12.15□□□□□ -0.46
LINC00339-213ENST00000642137 TMEM109Q9BVC6 243 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 CCDC68Q9H2F9 335 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 ERVMER34-1Q9H9K5 563 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 LATS2Q9NRM7 1088 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 SLC17A6Q9P2U8 582 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 KLQ9UEF7 1012 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 GNPTGQ9UJJ9 305 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 PLAAQ9Y263 795 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 ANKRD6Q9Y2G4 727 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 VWA7Q9Y334 891 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 NFS1Q9Y697 457 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 DGKBQ9Y6T7 804 aa12.15□□□□□ -0.46
LINC00339-213ENST00000642137 PI4KAP42356 2102 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 ATXN2Q99700 1313 aaKnown RBP12.14□□□□□ -0.47
LINC00339-213ENST00000642137 A0A0C4DFX4 3053 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 C17orf113A0A1B0GUU1 675 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 A0A1B0GVT2 93 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 PRSS38A1L453 326 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 KLHL33A6NCF5 533 aa12.14□□□□□ -0.47
LINC00339-213ENST00000642137 OR2AG2A6NM03 316 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms