RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ELFN1P0C7U0 828 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC166P0CW27 439 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 CPA3P15088 417 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF7P17097 686 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 DRD1P21728 446 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 RPS3P23396 243 aaKnown RBP eCLIP12.98□□□□□ -0.337e-8■■■■■ 28.3
PHGDH-221ENST00000641573 ALDH3A1P30838 453 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 NTSR1P30989 418 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 SLC26A3P40879 764 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ETV3P41162 512 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 GLRBP48167 497 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 LIG3P49916 1009 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 KPNA2P52292 529 aaKnown RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ADARP55265 1226 aaKnown RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 DCDC1P59894 354 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 MTAPQ13126 283 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 CSHL1Q14406 222 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ACOX1Q15067 660 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 CSRP2Q16527 193 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ATP13A5Q4VNC0 1218 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 SDE2Q6IQ49 451 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 LRRC8EQ6NSJ5 796 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 TMEM207Q6UWW9 146 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 LIPIQ6XZB0 460 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 Q6ZVL8 140 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 TECPR1Q7Z6L1 1165 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 RBFAQ8N0V3 343 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 KCNV2Q8TDN2 545 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 HEXDCQ8WVB3 486 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ANKRD49Q8WVL7 239 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 WRAP53Q9BUR4 548 aaKnown RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 CLPBQ9H078 707 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 RSPH9Q9H1X1 276 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 FGFR1OP2Q9NVK5 253 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ZDHHC3Q9NYG2 299 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 TAS2R13Q9NYV9 303 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 SIRPGQ9P1W8 387 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 NFKBIL1Q9UBC1 381 aaPredicted RBP12.98□□□□□ -0.33
PHGDH-221ENST00000641573 MID2Q9UJV3 735 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 MED16Q9Y2X0 877 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 PCDHB1Q9Y5F3 818 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 PKD1L2Q7Z442 2459 aa12.98□□□□□ -0.33
PHGDH-221ENST00000641573 ZNF106Q9H2Y7 1883 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 RNASEH1O60930 286 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 VPS26AO75436 327 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 PYGLP06737 847 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CD9P21926 228 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SHC2P98077 582 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SATB1Q01826 763 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CNTN1Q12860 1018 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SIM2Q14190 667 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 ITIH4Q14624 930 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 PCLAFQ15004 111 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CHI3L2Q15782 390 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CST6Q15828 149 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 FAM83EQ2M2I3 478 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SETMARQ53H47 684 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 AGAP9Q5VTM2 703 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 PTRHD1Q6GMV3 140 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 FAM47EQ6ZV65 393 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 NRSN1Q8IZ57 195 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 FSTL5Q8N475 847 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 OR2T3Q8NH03 318 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 RDH11Q8TC12 318 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 DTX3LQ8TDB6 740 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SCAMP4Q969E2 229 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 FAM136AQ96C01 138 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CCDC97Q96F63 343 aaPredicted RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 UBXN10Q96LJ8 280 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 COQ10AQ96MF6 247 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 GPR21Q99679 349 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 GABRG3Q99928 467 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 IER2Q9BTL4 223 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 RIOK2Q9BVS4 552 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 BOCQ9BWV1 1114 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 UNKQ9C0B0 810 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CDH19Q9H159 772 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 ABCG8Q9H221 673 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SYTL2Q9HCH5 934 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 CPSF2Q9P2I0 782 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 GALPQ9UBC7 116 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 COPG2Q9UBF2 871 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
PHGDH-221ENST00000641573 PRSS21Q9Y6M0 314 aa12.97□□□□□ -0.33
PHGDH-221ENST00000641573 SHISA7A6NL88 538 aa12.96□□□□□ -0.33
PHGDH-221ENST00000641573 G3V2L1 256 aa12.96□□□□□ -0.33
PHGDH-221ENST00000641573 NEMP1O14524 444 aa12.96□□□□□ -0.33
PHGDH-221ENST00000641573 KLF11O14901 512 aa12.96□□□□□ -0.33
PHGDH-221ENST00000641573 WNT9AO14904 365 aa12.96□□□□□ -0.33
PHGDH-221ENST00000641573 MID1O15344 667 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms