RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TBRG1Q3YBR2 411 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 ARHGAP36Q6ZRI8 547 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 GPRIN1Q7Z2K8 1008 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 AMIGO1Q86WK6 493 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 OR8H1Q8NGG4 311 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 TANKQ92844 425 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 RPL3LQ92901 407 aaKnown RBP11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 ASB9Q96DX5 294 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 MSANTD3Q96H12 275 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 MROQ9BYG7 248 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 RIBC2Q9H4K1 309 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 POPDC2Q9HBU9 364 aa11.77□□□□□ -0.53
RBFOX1-224ENST00000641259 MYBPHLA2RUH7 354 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 DNTTP04053 509 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 PGRP06401 933 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 YWHAQP27348 245 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 POLR2IP36954 125 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 PITX1P78337 314 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SLC6A3Q01959 620 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 ILF2Q12905 390 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TUBA3EQ6PEY2 450 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 EPGNQ6UW88 154 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 BBS12Q6ZW61 710 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF420Q8TAQ5 688 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 PHF21AQ96BD5 680 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TUBGCP3Q96CW5 907 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 GFM1Q96RP9 751 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TMEM209Q96SK2 561 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TBCDQ9BTW9 1192 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SLC30A1Q9Y6M5 507 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SOBPA7XYQ1 873 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF623O75123 536 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SNRPB2P08579 225 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 GRK4P32298 578 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 RPL34P49207 117 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 HNRNPFP52597 415 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 GRM3Q14832 879 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 MAPRE2Q15555 327 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 AASDHQ4L235 1098 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 NHSL2Q5HYW2 709 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SPANXN2Q5MJ10 180 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TDRD1Q9BXT4 1180 aaKnown RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SP140LQ9H930 580 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 SMURF2Q9HAU4 748 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 HOXC11O43248 304 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 POLBP06746 335 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 PRKAA1Q13131 559 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 TUBB3Q13509 450 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 CLEC20AQ6ZU45 233 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 KCNS3Q9BQ31 491 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 STARD7Q9NQZ5 370 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 XPR1Q9UBH6 696 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 PCDHB12Q9Y5F1 795 aa11.76□□□□□ -0.53
RBFOX1-224ENST00000641259 MOXD2PA6NHM9 499 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 TTC34A8MYJ7 566 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ABCB1P08183 1280 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 AGXTP21549 392 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 CXCR2P25025 360 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 OXTRP30559 389 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 INPP1P49441 399 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 RPS3AP61247 264 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 IFITM3Q01628 133 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ADIGQ0VDE8 80 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 TAZQ16635 292 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF280BQ86YH2 543 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 JPH3Q8WXH2 748 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 PCED1BQ96HM7 432 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 NODALQ96S42 347 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 C11orf84Q9BUA3 381 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 UNC93B1Q9H1C4 597 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 RMND5AQ9H871 391 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 TMPRSS4Q9NRS4 437 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ASNSD1Q9NWL6 643 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 KIAA1522Q9P206 1035 aaPredicted RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 SLCO3A1Q9UIG8 710 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF638Q14966 1978 aaKnown RBP11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 MED26O95402 600 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 IFITM2Q01629 132 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 CLLU1OSQ5K130 101 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 PNPLA1Q8N8W4 532 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ADAMTS16Q8TE57 1224 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 SNAPC3Q92966 411 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ELMO2Q96JJ3 720 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 LGMNQ99538 433 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 ERVK13-1Q9NX77 482 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 GMIPQ9P107 970 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 POLHQ9Y253 713 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 PCM1Q15154 2024 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 SAGE2PA6NJ88 616 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 BTN3A3O00478 584 aa11.75□□□□□ -0.53
RBFOX1-224ENST00000641259 LRIG2O94898 1065 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms