RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SAC3D1A6NKF1 404 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 E2F6O75461 281 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CLDN9O95484 217 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CHRNGP07510 517 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 KCNQ1P51787 676 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 MAPKAPK3Q16644 382 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SERPINA9Q86WD7 417 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FIBINQ8TAL6 211 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CENPNQ96H22 339 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HEPHQ9BQS7 1158 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FAM83DQ9H4H8 585 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 IL17CQ9P0M4 197 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SLC2A6Q9UGQ3 507 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 DHRS12A0PJE2 317 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 MEI4A8MW99 385 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PDE5AO76074 875 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PGLSO95336 258 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RPS17P08708 135 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ATXN1LP0C7T5 689 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HSD3B1P14060 373 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HSD3B2P26439 372 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ACVRL1P37023 503 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CCL23P55773 120 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TLE2Q04725 743 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ADGRE1Q14246 886 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PLEKHG6Q3KR16 790 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TCHHL1Q5QJ38 904 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ANXA8L1Q5VT79 327 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 AP1ARQ63HQ0 302 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 REP15Q6BDI9 236 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ZNF549Q6P9A3 640 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PRSS55Q6UWB4 352 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ADHFE1Q8IWW8 467 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 KREMEN2Q8NCW0 462 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 OR13J1Q8NGT2 312 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 LRRC3Q9BY71 257 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 C1QTNF3-AMACRE9PGA6 284 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RNASEH1O60930 286 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 NFATC1O95644 943 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SLC2A4P14672 509 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 MRPL19P49406 292 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 POLR2JP52435 117 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ZNF140P52738 457 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 YAF2Q8IY57 180 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HM13Q8TCT9 377 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CCDC97Q96F63 343 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CCDC138Q96M89 665 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FEM1AQ9BSK4 669 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CPEB1Q9BZB8 566 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 DNAJC11Q9NVH1 559 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SMPD4Q9NXE4 827 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 KCNE2Q9Y6J6 123 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FKBP9O95302 570 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 LYNP07948 512 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SLC7A2P52569 658 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 NME5P56597 212 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PDK3Q15120 406 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SPRED3Q2MJR0 410 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 KANK2Q63ZY3 851 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RNF165Q6ZSG1 346 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 R3HCC1LQ7Z5L2 792 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 WDR60Q8WVS4 1066 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PYDC1Q8WXC3 89 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 UTP4Q969X6 686 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 FAM120BQ96EK7 910 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ITCHQ96J02 903 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ZSCAN5AQ9BUG6 496 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RPS6KA6Q9UK32 745 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PSMD11O00231 422 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TBX18O95935 607 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TRBC1P01850 177 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ANXA6P08133 673 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CTSAP10619 480 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 HSD17B1P14061 328 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 S100A3P33764 101 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PSMD8P48556 350 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RPS24P62847 133 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 EIF4HQ15056 248 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 GPR180Q86V85 440 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 OR8J3Q8NGG0 315 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 OR13C4Q8NGS5 318 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TADA1Q96BN2 335 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CIPCQ9C0C6 399 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SUV39H2Q9H5I1 410 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TUBA8Q9NY65 449 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 ADGRE2Q9UHX3 823 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SEC22BO75396 215 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SLC25A14O95258 325 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RB1P06400 928 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SP100P23497 879 aaPredicted RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 TSNQ15631 228 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 RBM20Q5T481 1227 aaKnown RBP4.51□□□□□ -1.69
SCN1A-210ENST00000635776 PAQR3Q6TCH7 311 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CD300LGQ6UXG3 332 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 CHSY3Q70JA7 882 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 KBTBD6Q86V97 674 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 SVOPLQ8N434 492 aa4.51□□□□□ -1.69
SCN1A-210ENST00000635776 THUMPD3Q9BV44 507 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms