RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 SRRM3A6NNA2 597 aaPredicted RBP18.45■□□□□ 0.54
PNKP-224ENST00000631020 AGAP14A8MT82 685 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 EIF3HO15372 352 aaKnown RBP eCLIP18.45■□□□□ 0.54
PNKP-224ENST00000631020 SDC3O75056 442 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 USP1O94782 785 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 VAPBO95292 243 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 GOT2P00505 430 aaKnown RBP18.45■□□□□ 0.54
PNKP-224ENST00000631020 CSF2P04141 144 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 NME1P15531 152 aaKnown RBP18.45■□□□□ 0.54
PNKP-224ENST00000631020 PGAM1P18669 254 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 YPEL5P62699 121 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 CDK3Q00526 305 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 DNAJC3Q13217 504 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 NFATC2Q13469 925 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 FZD2Q14332 565 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 TRIM74Q86UV6 250 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 CCDC25Q86WR0 208 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 PIANPQ8IYJ0 282 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 ZBED8Q8IZ13 594 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 CACTIN-AS1Q8N1I8 211 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 BTN2A2Q8WVV5 523 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 UBXN4Q92575 508 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 ZNF669Q96BR6 464 aaPredicted RBP18.45■□□□□ 0.54
PNKP-224ENST00000631020 ASB8Q9H765 288 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 WDR26Q9H7D7 661 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 FAM169AQ9Y6X4 670 aa18.45■□□□□ 0.54
PNKP-224ENST00000631020 POLBP06746 335 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 MYBL2P10244 700 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 ALPPL2P10696 532 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CAMK2BQ13554 666 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 NAA30Q147X3 362 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 PDPK2PQ6A1A2 396 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 UNC5AQ6ZN44 842 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 UNC5BQ8IZJ1 945 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 OR6P1Q8NGX9 317 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 GLYATL1Q969I3 302 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 COX14Q96I36 57 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 HIC2Q96JB3 615 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 NAT9Q9BTE0 207 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 DUSP23Q9BVJ7 150 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 PHACTR1Q9C0D0 580 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CCDC86Q9H6F5 360 aaKnown RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 ARFGAP3Q9NP61 516 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 NLGN3Q9NZ94 848 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 IL1RAPL1Q9NZN1 696 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 ZC3H7BQ9UGR2 993 aaKnown RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 CSNK1G3Q9Y6M4 447 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 ACACAQ13085 2346 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 TMEM202A6NGA9 273 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 H3BM21 787 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 TRIM38O00635 465 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 SIGLEC6O43699 453 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 PYGLP06737 847 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 HOXC4P09017 264 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 GIMD1P0DJR0 217 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 FOXN2P32314 431 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 MAGEA4P43358 317 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 PRAMEP78395 509 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 PDE1CQ14123 709 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 PTK2BQ14289 1009 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CRYMQ14894 314 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 KHDC1Q4VXA5 237 aaKnown RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 ZRANB3Q5FWF4 1079 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 ZNF648Q5T619 568 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 STEAP4Q687X5 459 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 KCTD16Q68DU8 428 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 KIAA0930Q6ICG6 404 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 SNX20Q7Z614 316 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CCNJLQ8IV13 435 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 FAM181AQ8N9Y4 354 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 OR4L1Q8NH43 312 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CFAP36Q96G28 342 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 SGSM3Q96HU1 749 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 VPS35Q96QK1 796 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 FMO2Q99518 471 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 CAAP1Q9H8G2 361 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 DNAJC28Q9NX36 388 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 MARCH4Q9P2E8 410 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 MTRF1LQ9UGC7 380 aaKnown RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 PNMA8BQ9ULN7 279 aaPredicted RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 OAS3Q9Y6K5 1087 aaKnown RBP18.44■□□□□ 0.54
PNKP-224ENST00000631020 SLC30A1Q9Y6M5 507 aa18.44■□□□□ 0.54
PNKP-224ENST00000631020 TRBV5-4A0A0C4DH59 114 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 GOLGA8KD6RF30 607 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 GOLGA8TH3BQL2 631 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 SCAMP1O15126 338 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 FUCA1P04066 466 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 FAM153BP0C7A2 387 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 MYCLP1P12525 358 aaPredicted RBP18.43■□□□□ 0.54
PNKP-224ENST00000631020 KIAA1024LP59773 190 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 CACNG1Q06432 222 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 ITGA9Q13797 1035 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 SEMA3AQ14563 771 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 NFATC4Q14934 902 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 FAM153CQ494X1 144 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 CCDC157Q569K6 752 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 GSPT2Q8IYD1 628 aaKnown RBP18.43■□□□□ 0.54
PNKP-224ENST00000631020 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.43■□□□□ 0.54
PNKP-224ENST00000631020 PYROXD1Q8WU10 500 aa18.43■□□□□ 0.54
PNKP-224ENST00000631020 C9orf72Q96LT7 481 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms