RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 BRD9Q9H8M2 597 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 CD274Q9NZQ7 290 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 KLHL42Q9P2K6 505 aa21.82■■□□□ 1.08
PNKP-220ENST00000627232 PRPF19Q9UMS4 504 aaKnown RBP21.82■■□□□ 1.08
PNKP-220ENST00000627232 PER2O15055 1255 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 MLYCDO95822 493 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 ASLP04424 464 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 UGT1A6P19224 532 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 UGT1A1P22309 533 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 UGT1A4P22310 534 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 DGKAP23743 735 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 UGT1A3P35503 534 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 UGT1A5P35504 534 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 GCKP35557 465 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 NNMTP40261 264 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 HK3P52790 923 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 IRX1P78414 480 aaPredicted RBP21.81■■□□□ 1.08
PNKP-220ENST00000627232 TBL3Q12788 808 aaKnown RBP21.81■■□□□ 1.08
PNKP-220ENST00000627232 GPM6BQ13491 265 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 C1orf146Q5VVC0 180 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 TMEM215Q68D42 235 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 EFL1Q7Z2Z2 1120 aaKnown RBP21.81■■□□□ 1.08
PNKP-220ENST00000627232 KYQ8NBH2 561 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 CHST14Q8NCH0 376 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 WFIKKN2Q8TEU8 576 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 MRGPRX3Q96LB0 322 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 BOCQ9BWV1 1114 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 NUSAP1Q9BXS6 441 aaKnown RBP21.81■■□□□ 1.08
PNKP-220ENST00000627232 PIDD1Q9HB75 910 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 ZDHHC3Q9NYG2 299 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 CDH22Q9UJ99 828 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 PCTPQ9UKL6 214 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 SLC8A2Q9UPR5 921 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 DNAJC15Q9Y5T4 150 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 PRSS21Q9Y6M0 314 aa21.81■■□□□ 1.08
PNKP-220ENST00000627232 TSPAN11A1L157 253 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 A8MX80 341 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 SRPRAP08240 638 aaKnown RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 CYP2A6P11509 494 aaPredicted RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 ZNF30P17039 623 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 NSG1P42857 185 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 DHCR24Q15392 516 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 TGFBIQ15582 683 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 OR56A4Q8NGH8 313 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 FRS2Q8WU20 508 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 TWIST2Q8WVJ9 160 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 SMG7Q92540 1137 aaKnown RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 PBXIP1Q96AQ6 731 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 MARK4Q96L34 752 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 KLHL32Q96NJ5 620 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 ANKRD27Q96NW4 1050 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 EFCAB1Q9HAE3 211 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 H0Y3Z8 333 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 AIM2O14862 343 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 VPS4BO75351 444 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 KRT36O76013 467 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 SLC25A14O95258 325 aaPredicted RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 C1SP09871 688 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 LHCGRP22888 699 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 NFKBIAP25963 317 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 NUDT2P50583 147 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 ERVK-21P61565 698 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 PTK2BQ14289 1009 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 RCN1Q15293 331 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 MYO1HQ8N1T3 1032 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 FBXW8Q8N3Y1 598 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 ZBTB2Q8N680 514 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 ITFG1Q8TB96 612 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 DUS2Q9NX74 493 aaKnown RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 PKD2L2Q9NZM6 624 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 STX18Q9P2W9 335 aaKnown RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 STOML1Q9UBI4 398 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 B4GALT6Q9UBX8 382 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 C15orf41Q9Y2V0 281 aa21.8■■□□□ 1.08
PNKP-220ENST00000627232 TNPO3Q9Y5L0 923 aaKnown RBP21.8■■□□□ 1.08
PNKP-220ENST00000627232 PPP6CO00743 305 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 HOXC11O43248 304 aaPredicted RBP21.79■■□□□ 1.08
PNKP-220ENST00000627232 ESRRBO95718 433 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 CYP17A1P05093 508 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 CISD3P0C7P0 127 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 SPINT3P49223 89 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 CBX2Q14781 532 aaPredicted RBP21.79■■□□□ 1.08
PNKP-220ENST00000627232 PCBP2Q15366 365 aaKnown RBP eCLIP21.79■■□□□ 1.08
PNKP-220ENST00000627232 GEN1Q17RS7 908 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 GPRC6AQ5T6X5 926 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 FRA10AC1Q70Z53 315 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 MYLK4Q86YV6 388 aaPredicted RBP21.79■■□□□ 1.08
PNKP-220ENST00000627232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.79■■□□□ 1.08
PNKP-220ENST00000627232 DSELQ8IZU8 1212 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 PGAM4Q8N0Y7 254 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 NAT16Q8N8M0 369 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 LKAAEAR1Q8TD35 194 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 DTX3LQ8TDB6 740 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 HCAR2Q8TDS4 363 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 OSCP1Q8WVF1 389 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 CCDC97Q96F63 343 aaPredicted RBP21.79■■□□□ 1.08
PNKP-220ENST00000627232 LRIG1Q96JA1 1093 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 SERPINI1Q99574 410 aa21.79■■□□□ 1.08
PNKP-220ENST00000627232 SEMA4BQ9NPR2 832 aaPredicted RBP21.79■■□□□ 1.08
PNKP-220ENST00000627232 SPATS2LQ9NUQ6 558 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms