RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 AZIN1O14977 448 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 COX4I1P13073 169 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 EPHA3P29320 983 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 EIF2DP41214 584 aaKnown RBP16.17■□□□□ 0.18
LDB3-208ENST00000623007 KCNC1P48547 511 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 PIK3CGP48736 1102 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 PTSQ03393 145 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 GEN1Q17RS7 908 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 NET1Q7Z628 596 aaPredicted RBP16.17■□□□□ 0.18
LDB3-208ENST00000623007 GPR149Q86SP6 731 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 SCUBE1Q8IWY4 988 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 NPAS3Q8IXF0 933 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 ETFBKMTQ8IXQ9 262 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 CPNE9Q8IYJ1 553 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 CPA6Q8N4T0 437 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 EEF1AKMT1Q8WVE0 214 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 PPP1R16AQ96I34 528 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 SMIM14Q96QK8 99 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 OR52B2Q96RD2 323 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 ZNF385DQ9H6B1 395 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 DCLRE1BQ9H816 532 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 RDH14Q9HBH5 336 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 ZBTB26Q9HCK0 441 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 MID1IP1Q9NPA3 183 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 MRPL40Q9NQ50 206 aaKnown RBP16.17■□□□□ 0.18
LDB3-208ENST00000623007 TMEM45AQ9NWC5 275 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 ELOVL2Q9NXB9 296 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 B4GALT6Q9UBX8 382 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 BCAP29Q9UHQ4 241 aa16.17■□□□□ 0.18
LDB3-208ENST00000623007 PRPF19Q9UMS4 504 aaKnown RBP16.17■□□□□ 0.18
LDB3-208ENST00000623007 EDDM13A0A1B0GTR0 161 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 CRCPO75575 148 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 SLC25A14O95258 325 aaPredicted RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 ENO2P09104 434 aaPredicted RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 PCSK2P16519 638 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 EEF1DP29692 281 aaKnown RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 STX1BP61266 288 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 BTKQ06187 659 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 ELP6Q0PNE2 266 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 STX5Q13190 355 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 CYLC2Q14093 348 aaPredicted RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 PCBP2Q15366 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
LDB3-208ENST00000623007 TGFBIQ15582 683 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 KANK2Q63ZY3 851 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 DPPA4Q7L190 304 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 DSG4Q86SJ6 1040 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 ZSWIM9Q86XI8 627 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 PELI3Q8N2H9 469 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 TCAIMQ8N3R3 496 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 TRAM1L1Q8N609 369 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 PDPRQ8NCN5 879 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 TMIEQ8NEW7 156 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 ZNF483Q8TF39 744 aaPredicted RBP16.16■□□□□ 0.18
LDB3-208ENST00000623007 EXT2Q93063 718 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 C19orf60Q96EN9 201 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 DCUN1D1Q96GG9 259 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 ANKRD27Q96NW4 1050 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 FAM83DQ9H4H8 585 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 OARD1Q9Y530 152 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 WASF2Q9Y6W5 498 aa16.16■□□□□ 0.18
LDB3-208ENST00000623007 PABPN1LA6NDY0 278 aaKnown RBP16.15■□□□□ 0.18
LDB3-208ENST00000623007 NPEPPSL1A6NEC2 478 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 CDC7O00311 574 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 NEMP1O14524 444 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 TULP3O75386 442 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 LEFTY1O75610 366 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 ARHGEF15O94989 841 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 UROSP10746 265 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 PIK3R1P27986 724 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 ACADVLP49748 655 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 GRIK2Q13002 908 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 SHHQ15465 462 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 ZNF284Q2VY69 593 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 FAM78AQ5JUQ0 283 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 C9orf50Q5SZB4 431 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 GPRC6AQ5T6X5 926 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 PPP2R2DQ66LE6 453 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 TMC5Q6UXY8 1006 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 ADGRD2Q7Z7M1 963 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 NAT16Q8N8M0 369 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 GPR26Q8NDV2 337 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 OR8D1Q8WZ84 308 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 FGF13Q92913 245 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 STMN2Q93045 179 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 VOPP1Q96AW1 172 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 TRIM54Q9BYV2 358 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 WDR55Q9H6Y2 383 aaPredicted RBP16.15■□□□□ 0.18
LDB3-208ENST00000623007 EFCAB1Q9HAE3 211 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 ZFP14Q9HCL3 533 aa16.15■□□□□ 0.18
LDB3-208ENST00000623007 SARS2Q9NP81 518 aaKnown RBP16.15■□□□□ 0.18
LDB3-208ENST00000623007 UBDO15205 165 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 CDK14O94921 469 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 ESRRBO95718 433 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 VCLP18206 1134 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 LHCGRP22888 699 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 SP140Q13342 867 aa16.14■□□□□ 0.18
LDB3-208ENST00000623007 SULT1C3Q6IMI6 304 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms