RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KIAA1161Q6NSJ0 714 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 SYCE2Q6PIF2 218 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PIM3Q86V86 326 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF761Q86XN6 746 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 GATAD2AQ86YP4 633 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM126BQ8IUX1 230 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 EID2Q8N6I1 236 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 SIDT2Q8NBJ9 832 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 ATXN2LQ8WWM7 1075 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 SLC22A18Q96BI1 424 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 PRICKLE1Q96MT3 831 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 NEUROG2Q9H2A3 272 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 GAREM1Q9H706 876 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 LTB4R2Q9NPC1 389 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 FAM86C1Q9NVL1 165 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 OBP2AQ9NY56 170 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 NINJ2Q9NZG7 142 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CAPN7Q9Y6W3 813 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 A0A1B0GUL6 1792 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ECM29Q5VYK3 1845 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TRIP12Q14669 1992 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM221A6NGB7 291 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 M0R296 226 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TBX10O75333 385 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ZWINTO95229 277 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 OAS1P00973 400 aaKnown RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 POLR2CP19387 275 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 NMBRP28336 390 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 RABIFP47224 123 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 NAGLUP54802 743 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 MPP1Q00013 466 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM115Q12893 351 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 MAPRE2Q15555 327 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ATP13A5Q4VNC0 1218 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CMC1Q7Z7K0 106 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CREG2Q8IUH2 290 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 FNDC5Q8NAU1 212 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 TRPC4APQ8TEL6 797 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 BTN2A2Q8WVV5 523 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 MR1Q95460 341 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF689Q96CS4 500 aaPredicted RBP9□□□□□ -0.97
HDAC9-229ENST00000622668 SGSM3Q96HU1 749 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 MYRFLQ96LU7 910 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 NDC1Q9BTX1 674 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 EFHD1Q9BUP0 239 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CEP44Q9C0F1 390 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 CAB39LQ9H9S4 337 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 SALL4Q9UJQ4 1053 aa9□□□□□ -0.97
HDAC9-229ENST00000622668 ZNF831Q5JPB2 1677 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 EP400Q96L91 3159 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 MYH7BA7E2Y1 1941 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 LOC100653049A0A140TA62 436 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 A0A1B0GVT2 93 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FAM221BA6H8Z2 402 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ZSCAN9O15535 394 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 KRT34O76011 436 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ATP6V1C1P21283 382 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RAB10P61026 200 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ZBTB17Q13105 803 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 PTPRCAPQ14761 206 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 EML3Q32P44 896 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RAB6CQ53S08 254 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 DCAF12L1Q5VU92 463 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SCIMPQ6UWF3 145 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 KDM7AQ6ZMT4 941 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CHSY3Q70JA7 882 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SPEM1Q8N4L4 309 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CDYL2Q8N8U2 506 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 INPP5DQ92835 1189 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FAIM2Q9BWQ8 316 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RAB6CQ9H0N0 254 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 NPHS2Q9NP85 383 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 MTMR10Q9NXD2 777 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SLC24A2Q9UI40 661 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FAF1Q9UNN5 650 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CA5BQ9Y2D0 317 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 LAMB2P55268 1798 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 A0A1B0GTW7 788 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 TCP11X1B4DZS4 312 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CLDN4O14493 209 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 TPP1O14773 563 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 DUX1O43812 170 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ESR1P03372 595 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 MLNP12872 115 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 MASP1P48740 699 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CDH13P55290 713 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 ATP6V0D1P61421 351 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 CDKN3Q16667 212 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 RALGPS1Q5JS13 557 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 PAGE2Q7Z2X7 111 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 SYT12Q8IV01 421 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 FBXL6Q8N531 539 aa8.99□□□□□ -0.97
HDAC9-229ENST00000622668 NAT14Q8WUY8 206 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms