RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CBFA2T3O75081 653 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 VAPBO95292 243 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 LDOC1O95751 146 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 ACRV1P26436 265 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 FOXN2P32314 431 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 PUM1Q14671 1186 aaKnown RBP eCLIP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 HIF1AQ16665 826 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 ANKRD20A4Q4UJ75 823 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 MSS51Q4VC12 460 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 LVRNQ6Q4G3 990 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 DET1Q7L5Y6 550 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 LRRTM4Q86VH4 590 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 NRROSQ86YC3 692 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TRAPPC5Q8IUR0 188 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 ZNF669Q96BR6 464 aaPredicted RBP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TTC1Q99614 292 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 CDC6Q99741 560 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 TRIM56Q9BRZ2 755 aaKnown RBP18.34■□□□□ 0.53
CIRBP-245ENST00000621399 GRHL1Q9NZI5 618 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 FTSJ1Q9UET6 329 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 RPS6KL1Q9Y6S9 549 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 DNAH14Q0VDD8 3507 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 CABIN1Q9Y6J0 2220 aa18.34■□□□□ 0.53
CIRBP-245ENST00000621399 KMOO15229 486 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 CD3EAPO15446 510 aaKnown RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 BANF1O75531 89 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 POLBP06746 335 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 ACP5P13686 325 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 AK4P27144 223 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 ID4P47928 161 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 NOVA1P51513 510 aaKnown RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 TRIP6Q15654 476 aaKnown RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 DBN1Q16643 649 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 LYPLAL1Q5VWZ2 237 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 KIAA0930Q6ICG6 404 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 SLC30A9Q6PML9 568 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 TMEM220Q6QAJ8 160 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 CERS6Q6ZMG9 384 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 TMEM135Q86UB9 458 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 FAM46DQ8NEK8 389 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 SGF29Q96ES7 293 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 ZNF514Q96K75 400 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 CNDP2Q96KP4 475 aaKnown RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 FCRL3Q96P31 734 aaPredicted RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 EBNA1BP2Q99848 306 aaKnown RBP18.33■□□□□ 0.52
CIRBP-245ENST00000621399 CATSPERZQ9NTU4 200 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 GPR34Q9UPC5 381 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 MYLKQ15746 1914 aa18.33■□□□□ 0.52
CIRBP-245ENST00000621399 OR2AG2A6NM03 316 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 USP1O94782 785 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 CEACAM1P13688 526 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 PGAM1P18669 254 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 KCNA4P22459 653 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 PPARGP37231 505 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ACTR1BP42025 376 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 CTSCP53634 463 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 DRG2P55039 364 aaKnown RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 PLTPP55058 493 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ACTR1AP61163 376 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 B4GALNT1Q00973 533 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 GUCY2DQ02846 1103 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 CAV1Q03135 178 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 TRADDQ15628 312 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 INSCQ1MX18 579 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 PLA2G4EQ3MJ16 856 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 GLE1Q53GS7 698 aaKnown RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 AARS2Q5JTZ9 985 aaKnown RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 HP1BP3Q5SSJ5 553 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 C6orf132Q5T0Z8 1188 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ZCCHC8Q6NZY4 707 aaKnown RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ZNF547Q8IVP9 402 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 OTUD6BQ8N6M0 293 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 PNPLA1Q8N8W4 532 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 BAHD1Q8TBE0 780 aaPredicted RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 NAT14Q8WUY8 206 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 GLMNQ92990 594 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 NAT9Q9BTE0 207 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 BOCQ9BWV1 1114 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 DPEP2Q9H4A9 486 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 TAAR2Q9P1P5 351 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 KCNK6Q9Y257 313 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ST14Q9Y5Y6 855 aa18.32■□□□□ 0.52
CIRBP-245ENST00000621399 ASCC3Q8N3C0 2202 aaKnown RBP18.32■□□□□ 0.52
CIRBP-245ENST00000621399 IGLV3-16A0A075B6K0 115 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ESYT3A0FGR9 886 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 GOLGA8KD6RF30 607 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 GOLGA8TH3BQL2 631 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 TNFSF14O43557 240 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 POP7O75817 140 aaKnown RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 KCNK5O95279 499 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ATP1B2P14415 290 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ZNF7P17097 686 aaPredicted RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ARNTP27540 789 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ELK3P41970 407 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ARCN1P48444 511 aaKnown RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 PDIA2Q13087 525 aaKnown RBP18.31■□□□□ 0.52
CIRBP-245ENST00000621399 ITIH4Q14624 930 aa18.31■□□□□ 0.52
CIRBP-245ENST00000621399 SMAD1Q15797 465 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms