RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 OSGEPL1Q9H4B0 414 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 CLMPQ9H6B4 373 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 PIH1D1Q9NWS0 290 aaKnown RBP15.78■□□□□ 0.12
BRCA1-228ENST00000618469 APPL1Q9UKG1 709 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 KCTD3Q9Y597 815 aa15.78■□□□□ 0.12
BRCA1-228ENST00000618469 HECTD1Q9ULT8 2610 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ERVH48-1M5A8F1 160 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 CHUKO15111 745 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 VEGFDO43915 354 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A9O60656 530 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 SNX2O60749 519 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 CDK14O94921 469 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 EML2O95834 649 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 PNLIPP16233 465 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A6P19224 532 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A1P22309 533 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A4P22310 534 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 AKT1P31749 480 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 STIP1P31948 543 aaKnown RBP15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A3P35503 534 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A5P35504 534 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ZNF140P52738 457 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-228ENST00000618469 GABREP78334 506 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 TMPRSS15P98073 1019 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 MAP9Q49MG5 647 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 C3orf38Q5JPI3 329 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ZNF438Q7Z4V0 828 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 B3GNT8Q7Z7M8 397 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 PRUNE1Q86TP1 453 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 DDHD1Q8NEL9 900 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 OR13C4Q8NGS5 318 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 DTX3LQ8TDB6 740 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 BRSK1Q8TDC3 778 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 SLC37A2Q8TED4 501 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 MAIP1Q8WWC4 291 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A7Q9HAW7 530 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A10Q9HAW8 530 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 UGT1A8Q9HAW9 530 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ARNT2Q9HBZ2 717 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 KLC4Q9NSK0 619 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 SMOXQ9NWM0 555 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 TBC1D29Q9UFV1 150 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ATXN7L1Q9ULK2 861 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-228ENST00000618469 DNAJC16Q9Y2G8 782 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 ENTPD2Q9Y5L3 495 aa15.77■□□□□ 0.12
BRCA1-228ENST00000618469 TRBV23OR9-2A0A075B6M9 112 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 E7EVH7 732 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 CCL22O00626 93 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 KMOO15229 486 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 PSMD3O43242 534 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 ZSCAN12O43309 604 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 ETS1P14921 441 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 TPH1P17752 444 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 CA5AP35218 305 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 FDFT1P37268 417 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 LMAN1P49257 510 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 PDE1BQ01064 536 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 MSLNQ13421 630 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-228ENST00000618469 POU6F1Q14863 301 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 CCNG2Q16589 344 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 LONRF2Q1L5Z9 754 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 AMZ1Q400G9 498 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 LDLRAP1Q5SW96 308 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 GPRC6AQ5T6X5 926 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 ZNF547Q8IVP9 402 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 SFRP1Q8N474 314 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 GLIS1Q8NBF1 620 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 DNAJC1Q96KC8 554 aaKnown RBP15.76■□□□□ 0.11
BRCA1-228ENST00000618469 TTC25Q96NG3 672 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 TIMM29Q9BSF4 260 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 FOXP3Q9BZS1 431 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 EPB41L5Q9HCM4 733 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 SATB2Q9UPW6 733 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
BRCA1-228ENST00000618469 A6NCN8 305 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 PDZK1P1A8MUH7 402 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 LDB2O43679 373 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 SLC28A2O43868 658 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 SRP72O76094 671 aaKnown RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 F3P13726 295 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 SLC2A4P14672 509 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ZNF7P17097 686 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ALDH4A1P30038 563 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 OR1D5P58170 312 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 KCNC4Q03721 635 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 TMEM115Q12893 351 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 NFATC2Q13469 925 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 NR1D2Q14995 579 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 SEPT7Q16181 437 aaKnown RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 FOXR1Q6PIV2 292 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 LINC00523Q86TU6 105 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ZNF761Q86XN6 746 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 REXO1L1PQ8IX06 675 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 OR52K1Q8NGK4 314 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ZNF398Q8TD17 642 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 GRAMD1AQ96CP6 724 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 STN1Q9H668 368 aaKnown RBP15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ASB8Q9H765 288 aa15.75■□□□□ 0.11
BRCA1-228ENST00000618469 ETNK1Q9HBU6 452 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms