RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 SPECC1L-ADORA2AF8WAN1 911 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 WNT9AO14904 365 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SNX3O60493 162 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 TGM1P22735 817 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 ATP5F1P24539 256 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 IL12RB1P42701 662 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SOX9P48436 509 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 HK2P52789 917 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 IRF9Q00978 393 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SEMA3AQ14563 771 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SETDB1Q15047 1291 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 CHRNA6Q15825 494 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 HSF5Q4G112 596 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 FBXO43Q4G163 708 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZNF789Q5FWF6 425 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 CFAP157Q5JU67 520 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 LIPMQ5VYY2 423 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 PARS2Q7L3T8 475 aaKnown RBP16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 PIGWQ7Z7B1 504 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 FSTL5Q8N475 847 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 CXorf40AQ8TE69 158 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 NXNL1Q96CM4 212 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SMIM14Q96QK8 99 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 OLFM1Q99784 485 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 SMOXQ9NWM0 555 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 DNAH14Q0VDD8 3507 aa16.62■□□□□ 0.25
TRAPPC3-210ENST00000617904 KIAA1549LQ6ZVL6 1849 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 LZTS3O60299 673 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 DCTN3O75935 186 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 CTSLP07711 333 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 TPBGLP0DKB5 382 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 HLA-EP13747 358 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 ADRB3P13945 408 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZNF37AP17032 561 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 MSH3P20585 1137 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 C5AR1P21730 350 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 DGKAP23743 735 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 NTSR1P30989 418 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 AKT1P31749 480 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 MMP12P39900 470 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 CCR3P51677 355 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 SATB1Q01826 763 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 PCLAFQ15004 111 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 LDLRAP1Q5SW96 308 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 EGFLAMQ63HQ2 1017 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZNF776Q68DI1 518 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZNF765Q7L2R6 523 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 CYP2U1Q7Z449 544 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 HOMEZQ8IX15 550 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 ZNF366Q8N895 744 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 GBP7Q8N8V2 638 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 GPR26Q8NDV2 337 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 RHEBL1Q8TAI7 183 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 INPP5DQ92835 1189 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 UBXN10Q96LJ8 280 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 DERL2Q9GZP9 239 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 C12orf65Q9H3J6 166 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 TFB2MQ9H5Q4 396 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 EML4Q9HC35 981 aaKnown RBP16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 PRSS16Q9NQE7 514 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 OXSMQ9NWU1 459 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 NCKIPSDQ9NZQ3 722 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 KLHL42Q9P2K6 505 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 XPR1Q9UBH6 696 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 EMCNQ9ULC0 261 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 SCML1Q9UN30 329 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 USH1CQ9Y6N9 552 aa16.61■□□□□ 0.25
TRAPPC3-210ENST00000617904 AGAP14A8MT82 685 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 TSPAN6O43657 245 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 AP2A2O94973 939 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 HSPA4LO95757 839 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 S100BP04271 92 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 C1SP09871 688 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CBSLP0DN79 551 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 TFEBP19484 476 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 LHCGRP22888 699 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CTHP32929 405 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CBSP35520 551 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CXCL12P48061 93 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 GLRBP48167 497 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 PSMD8P48556 350 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 SLC1A6P48664 564 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CDKN2DP55273 166 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 SETMARQ53H47 684 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 TXNDC11Q6PKC3 985 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 MACC1Q6ZN28 852 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 PIWIL4Q7Z3Z4 852 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 MMAAQ8IVH4 418 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 C10orf107Q8IVU9 208 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 PIANPQ8IYJ0 282 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CENPLQ8N0S6 344 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 PLD6Q8N2A8 252 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 ACVR1CQ8NER5 493 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CHFRQ96EP1 664 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 P2RY12Q9H244 342 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 SPATS2LQ9NUQ6 558 aaKnown RBP16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CACNA2D2Q9NY47 1150 aa16.6■□□□□ 0.25
TRAPPC3-210ENST00000617904 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms