RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ZNF789Q5FWF6 425 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 P3H2Q8IVL5 708 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 EEF1AKMT1Q8WVE0 214 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 DPF3Q92784 378 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 KLHL32Q96NJ5 620 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 OLFM1Q99784 485 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 FAM83DQ9H4H8 585 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 FBRSL1Q9HCM7 1045 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 MIEF1Q9NQG6 463 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 OR2AG2A6NM03 316 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 KERAO60938 352 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 S1PR4O95977 384 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 RAD23AP54725 363 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 RRM2BQ7LG56 351 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 PXYLP1Q8TE99 480 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
PPP4R3B-206ENST00000616407 C2orf78A6NCI8 922 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 CLDN7O95471 211 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 GKP32189 559 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZIK1Q3SY52 487 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 C16orf87Q6PH81 154 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 DSG4Q86SJ6 1040 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ATG16L2Q8NAA4 619 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ADCY4Q8NFM4 1077 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ATL1Q8WXF7 558 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 LZICQ8WZA0 190 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 TRAPPC9Q96Q05 1148 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 SLC39A3Q9BRY0 314 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 KCNK13Q9HB14 408 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 TBC1D14Q9P2M4 693 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 GIMAP2Q9UG22 337 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 SLC22A2O15244 555 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 INPPL1O15357 1258 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 STC2O76061 302 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ALDH9A1P49189 494 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 BLMHQ13867 455 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 SCN3BQ9NY72 215 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ASB3Q9Y575 518 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 PDZK1P1A8MUH7 402 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 XIAPP98170 497 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 DMC1Q14565 340 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 TECRLQ5HYJ1 363 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 CCDC81Q6ZN84 652 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ACVR1CQ8NER5 493 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 NAT14Q8WUY8 206 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 PCDH12Q9NPG4 1184 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 FAM149AA5PLN7 773 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 G3V2L1 256 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 HNRNPRO43390 633 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 MT-ND1P03886 318 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 GPC1P35052 558 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 AQP4P55087 323 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 GPR180Q86V85 440 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 GPR156Q8NFN8 814 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 SPPL2AQ8TCT8 520 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 APOLD1Q96LR9 279 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 KCNA7Q96RP8 456 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZBTB26Q9HCK0 441 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 EMCNQ9ULC0 261 aa13.06□□□□□ -0.32
PPP4R3B-206ENST00000616407 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 HS6ST1O60243 411 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 CLTBP09497 229 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 SLC26A3P40879 764 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 TMCO2Q7Z6W1 182 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 EID3Q8N140 333 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 OR2T34Q8NGX1 318 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 OR2T3Q8NH03 318 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 TPD52L3Q96J77 140 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 RAD18Q9NS91 495 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 DPPA5A6NC42 116 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 FFAR2O15552 330 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 CDK14O94921 469 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 LYNP07948 512 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 ZNF37AP17032 561 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 PTPN2P17706 415 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 NSG1P42857 185 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 MAGEA3P43357 314 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 ECT2LQ008S8 904 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 LIPEQ05469 1076 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 DSC3Q14574 896 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 CHRNA6Q15825 494 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.324e-7■■■■□ 21.6
PPP4R3B-206ENST00000616407 PHACTR4Q8IZ21 702 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 MAPK15Q8TD08 544 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 MZB1Q8WU39 189 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 SH3GL3Q99963 347 aa13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 SMG9Q9H0W8 520 aaKnown RBP13.05□□□□□ -0.32
PPP4R3B-206ENST00000616407 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms