RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ARCN1P48444 511 aaKnown RBP5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 POLR2LP62875 67 aaKnown RBP5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRIM32Q13049 653 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCNIQ14094 377 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 DEFB115Q30KQ5 88 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 FAM174BQ3ZCQ3 159 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 KDELC1Q6UW63 502 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 DNAJB7Q7Z6W7 309 aaPredicted RBP5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 SAPCD2Q86UD0 394 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 PIANPQ8IYJ0 282 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 NSUN5Q96P11 429 aaKnown RBP5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 PLEKHG4BQ96PX9 1271 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 KCNA7Q96RP8 456 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 EMILIN2Q9BXX0 1053 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 HIPK3Q9H422 1215 aa5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 SMPD3Q9NY59 655 aaPredicted RBP5.59□□□□□ -1.52
SYNCRIP-204ENST00000616122 KERAO60938 352 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PARNO95453 639 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GDF5P43026 501 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 KIR3DL1P43629 444 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPS9P46781 194 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 DGKQP52824 942 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 USP46P62068 366 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATXN7L2Q5T6C5 722 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GRAMD4Q6IC98 578 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MRPL10Q7Z7H8 261 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC44A2Q8IWA5 706 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 OFCC1Q8IZS5 231 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 AHI1Q8N157 1196 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPPL2AQ8TCT8 520 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ROGDIQ9GZN7 287 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RNF186Q9NXI6 227 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRKAG2Q9UGJ0 569 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 VPS51Q9UID3 782 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MOSPD1Q9UJG1 213 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RAB26Q9ULW5 256 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATP11BQ9Y2G3 1177 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NUMBLQ9Y6R0 609 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 BCORQ6W2J9 1755 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MYH9P35579 1960 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM247A6NEH6 219 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SORBS2O94875 1100 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GALTP07902 379 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ANXA6P08133 673 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPIAP49247 311 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCT8P50990 548 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SNRPD1P62314 119 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TLE2Q04725 743 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TGFBIQ15582 683 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 HSF5Q4G112 596 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCDC81Q6ZN84 652 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ITIH5Q86UX2 942 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NPAS4Q8IUM7 802 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NAT14Q8WUY8 206 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PYCR2Q96C36 320 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 UBXN10Q96LJ8 280 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR52E6Q96RD3 313 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRIM8Q9BZR9 551 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 EXOSC4Q9NPD3 245 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM248Q9NWD8 314 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PCDHB1Q9Y5F3 818 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZFP37Q9Y6Q3 630 aaPredicted RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ANKRD36CQ5JPF3 1778 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 AKAP6Q13023 2319 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 DDX60LQ5H9U9 1706 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TFAP2AP05549 437 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CNPP09543 421 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 UROSP10746 265 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAPK1P28482 360 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CDH15P55291 814 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 IL5RAQ01344 420 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 DGCR6Q14129 220 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NADK2Q4G0N4 442 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 UNC50Q53HI1 259 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADCK2Q7Z695 626 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RETREG3Q86VR2 466 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR13J1Q8NGT2 312 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GRIN3AQ8TCU5 1115 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC13A3Q8WWT9 602 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RMND5AQ9H871 391 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RHBDL2Q9NX52 303 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SCN3BQ9NY72 215 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 FCF1Q9Y324 198 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 IQCF5A8MTL0 148 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NBNO60934 754 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CLIC3O95833 236 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 GSRP00390 522 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR56A5P0C7T3 313 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 NCK1P16333 377 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 HMGCLP35914 325 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPL34P49207 117 aaKnown RBP5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SH3BP2P78314 561 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 TNK2Q07912 1038 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTGR1Q14914 329 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 LYSMD3Q7Z3D4 306 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 SERPINA9Q86WD7 417 aa5.58□□□□□ -1.52
SYNCRIP-204ENST00000616122 CGREF1Q99674 301 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms