RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 LYPLAL1Q5VWZ2 237 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 NLRP8Q86W28 1048 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 CACUL1Q86Y37 369 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 MARCH9Q86YJ5 346 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 PIANPQ8IYJ0 282 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 TRAM1L1Q8N609 369 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 MDM1Q8TC05 714 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 LPGAT1Q92604 370 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ULK4Q96C45 1275 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ERLEC1Q96DZ1 483 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 ZSCAN5AQ9BUG6 496 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 WRAP53Q9BUR4 548 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 GTPBP2Q9BX10 602 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 KDM4CQ9H3R0 1056 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 FAM83DQ9H4H8 585 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 PREBQ9HCU5 417 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 FBXL12Q9NXK8 326 aa11.34□□□□□ -0.59
SLIRP-212ENST00000613856 USP36Q9P275 1121 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 NOVA2Q9UNW9 492 aaKnown RBP11.34□□□□□ -0.59
SLIRP-212ENST00000613856 NEMP1O14524 444 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 CFIP05156 583 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ACADMP11310 421 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ACRV1P26436 265 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 OAS2P29728 719 aaKnown RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 PPARGP37231 505 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 CCNFP41002 786 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ETV3P41162 512 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 SERPINB8P50452 374 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ADPRHP54922 357 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 DPTQ07507 201 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ITIH4Q14624 930 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ACOX1Q15067 660 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 CHRNA6Q15825 494 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ZNF284Q2VY69 593 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 KIAA1161Q6NSJ0 714 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 NEK5Q6P3R8 708 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 KIAA1324Q6UXG2 1013 aaKnown RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 RFLNAQ6ZTI6 216 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 Q6ZVL8 140 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 MICALCLQ6ZW33 695 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 RAB44Q7Z6P3 723 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 EXOC3L1Q86VI1 746 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 NXPE1Q8N323 547 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ZNF398Q8TD17 642 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ACMSDQ8TDX5 336 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ZBTB9Q96C00 473 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 NUS1Q96E22 293 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 VPS35Q96QK1 796 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 TTC1Q99614 292 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 SLC6A17Q9H1V8 727 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 ASB8Q9H765 288 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 SSU72Q9NP77 194 aaKnown RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
SLIRP-212ENST00000613856 MKS1Q9NXB0 559 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 NCKAP1Q9Y2A7 1128 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 APC2O95996 2303 aa11.33□□□□□ -0.6
SLIRP-212ENST00000613856 DOCK9Q9BZ29 2069 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 FAM95CA0A1B0GW59 222 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 FAM221BA6H8Z2 402 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 C10orf142B7Z368 130 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 MMP20O60882 483 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 NDUFS3O75489 264 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RFPL1O75677 317 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RECQL5O94762 991 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 HAUS5O94927 633 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 MT-ND3P03897 115 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ALDOAP04075 364 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 PRB1P04280 392 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 PYGLP06737 847 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 PRSS56P0CW18 603 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CD59P13987 128 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.65e-12■■■■■ 28.9
SLIRP-212ENST00000613856 TEAD1P28347 426 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CDKN1CP49918 316 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CSRP3P50461 194 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RPS21P63220 83 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 POU4F1Q01851 419 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SLC18A2Q05940 514 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ZKSCAN8Q15776 578 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 DBN1Q16643 649 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 MAP7D1Q3KQU3 841 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 ZNF789Q5FWF6 425 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 KCTD16Q68DU8 428 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 FAM45BPQ6NSW5 357 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 CNSTQ6PJW8 725 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SH2D5Q6ZV89 423 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 LDB1Q86U70 411 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SERPINA9Q86WD7 417 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SYT12Q8IV01 421 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 SRRM1Q8IYB3 904 aaKnown RBP11.32□□□□□ -0.6
SLIRP-212ENST00000613856 RBFAQ8N0V3 343 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
SLIRP-212ENST00000613856 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms