RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 EBNA1BP2Q99848 306 aaKnown RBP13.1□□□□□ -0.31
MDC1-209ENST00000613547 NCKIPSDQ9NZQ3 722 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 PCOLCE2Q9UKZ9 415 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 GPR34Q9UPC5 381 aa13.1□□□□□ -0.31
MDC1-209ENST00000613547 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 OR51F1A6NGY5 319 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 QSOX1O00391 747 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 YY2O15391 372 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 KCNJ13O60928 360 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 USP1O94782 785 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 FUCA1P04066 466 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 ACP5P13686 325 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 PMLP29590 882 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 ACTR1BP42025 376 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 NSG1P42857 185 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 RPIAP49247 311 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 TTPAP49638 278 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 PLTPP55058 493 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 ACTR1AP61163 376 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 CTBSQ01459 385 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 SLC7A5Q01650 507 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 PDIA2Q13087 525 aaKnown RBP13.09□□□□□ -0.31
MDC1-209ENST00000613547 THOC5Q13769 683 aaKnown RBP13.09□□□□□ -0.31
MDC1-209ENST00000613547 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
MDC1-209ENST00000613547 TCEA2Q15560 299 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 DBN1Q16643 649 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 LONRF1Q17RB8 773 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 ANKRD20A4Q4UJ75 823 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 KHDC1Q4VXA5 237 aaKnown RBP13.09□□□□□ -0.31
MDC1-209ENST00000613547 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 LMNTD2Q8IXW0 634 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 PIANPQ8IYJ0 282 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 RASGEF1AQ8N9B8 481 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
MDC1-209ENST00000613547 DEFB124Q8NES8 71 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 GPBAR1Q8TDU6 330 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 TIMM29Q9BSF4 260 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 FAM129AQ9BZQ8 928 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 FOXP3Q9BZS1 431 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 CLPBQ9H078 707 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 VPS37BQ9H9H4 285 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 L2HGDHQ9H9P8 463 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 FAM114A2Q9NRY5 505 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 DLL3Q9NYJ7 618 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 GRHL1Q9NZI5 618 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 BTBD3Q9Y2F9 522 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 PRKAB1Q9Y478 270 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
MDC1-209ENST00000613547 DOCK9Q9BZ29 2069 aa13.09□□□□□ -0.31
MDC1-209ENST00000613547 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 OR2AG2A6NM03 316 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 TM4SF5O14894 197 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 EIF3HO15372 352 aaKnown RBP eCLIP13.08□□□□□ -0.32
MDC1-209ENST00000613547 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 SIGLEC6O43699 453 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 LDOC1O95751 146 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 CEACAM1P13688 526 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 ATP1B2P14415 290 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 ZNF7P17097 686 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 CDKN1CP49918 316 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 DUSP3P51452 185 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 NOVA1P51513 510 aaKnown RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 DAB2P98082 770 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 SPANXN3Q5MJ09 141 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 RNF187Q5TA31 235 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 SLC30A9Q6PML9 568 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 TMEM220Q6QAJ8 160 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 DET1Q7L5Y6 550 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 ART4Q93070 314 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 CNDP2Q96KP4 475 aaKnown RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 DPEP2Q9H4A9 486 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 EPB41L5Q9HCM4 733 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 ZC3H7BQ9UGR2 993 aaKnown RBP13.08□□□□□ -0.32
MDC1-209ENST00000613547 VPS9D1Q9Y2B5 631 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 FAM169AQ9Y6X4 670 aa13.08□□□□□ -0.32
MDC1-209ENST00000613547 ESYT3A0FGR9 886 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 E7ESA3 106 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 TRIM38O00635 465 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 TP73O15350 636 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 TNFSF14O43557 240 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 CBFA2T3O75081 653 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 NDUFS3O75489 264 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 AP2A2O94973 939 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 CELA2BP08218 269 aaPredicted RBP13.07□□□□□ -0.32
MDC1-209ENST00000613547 PRSS56P0CW18 603 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 SLC2A4P14672 509 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 CA5AP35218 305 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 ELK3P41970 407 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 ID4P47928 161 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 CTSCP53634 463 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 BIRC2Q13490 618 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 CRYMQ14894 314 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 TRIP6Q15654 476 aaKnown RBP13.07□□□□□ -0.32
MDC1-209ENST00000613547 PLA2G4EQ3MJ16 856 aa13.07□□□□□ -0.32
MDC1-209ENST00000613547 BCL7AQ4VC05 210 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms