RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SZRD1Q7Z422 152 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 TRIM69Q86WT6 500 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 ULK2Q8IYT8 1036 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 GPR152Q8TDT2 470 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 SLC22A17Q8WUG5 538 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 LINGO1Q96FE5 620 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 CGREF1Q99674 301 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 CHRAC1Q9NRG0 131 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 SPASTQ9UBP0 616 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 BAIAP2Q9UQB8 552 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 TTC34A8MYJ7 566 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 RGS5O15539 181 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 PEX14O75381 377 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 METTL18O95568 372 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 ENDOUP21128 410 aaKnown RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 FASP25445 335 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 ARL4DP49703 201 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 RAB25P57735 213 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 LRRC74AQ0VAA2 488 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 CTBP1Q13363 440 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 LAPTM5Q13571 262 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 SIX1Q15475 284 aaPredicted RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 IL27RAQ6UWB1 636 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 PRSS55Q6UWB4 352 aaPredicted RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 TRMT11Q7Z4G4 463 aaKnown RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 CUZD1Q86UP6 607 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 PROSER1Q86XN7 944 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 SPERTQ8NA61 448 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 ANKLE1Q8NAG6 615 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 DNAJB8Q8NHS0 232 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 AZIN2Q96A70 460 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 FAM120BQ96EK7 910 aaKnown RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 TCF25Q9BQ70 676 aa8.65□□□□□ -1.02
PDE6A-204ENST00000613228 NKX1-2Q9UD57 310 aaPredicted RBP8.65□□□□□ -1.02
PDE6A-204ENST00000613228 DCLK1O15075 740 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 PRAMEF11O60813 436 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 SEC22BO75396 215 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 C8GP07360 202 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 CBSLP0DN79 551 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 PPIBP23284 216 aaKnown RBP8.65□□□□□ -1.03
PDE6A-204ENST00000613228 CBSP35520 551 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 PRIM2P49643 509 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 NAGLUP54802 743 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 SKP1P63208 163 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 TOP3AQ13472 1001 aaPredicted RBP8.65□□□□□ -1.03
PDE6A-204ENST00000613228 SLC1A5Q15758 541 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 PGS1Q32NB8 556 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 BROXQ5VW32 411 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 GALNT18Q6P9A2 607 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 ZNF655Q8N720 491 aaPredicted RBP8.65□□□□□ -1.03
PDE6A-204ENST00000613228 CNTD1Q8N815 330 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 OTULINQ96BN8 352 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 BIRC8Q96P09 236 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 AIFM2Q9BRQ8 373 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 WDR41Q9HAD4 459 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 FARSBQ9NSD9 589 aaKnown RBP8.65□□□□□ -1.03
PDE6A-204ENST00000613228 CPQQ9Y646 472 aa8.65□□□□□ -1.03
PDE6A-204ENST00000613228 LINC00854A0A1B0GVQ3 168 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 KPNA3O00505 521 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SEC24AO95486 1093 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 TCF4P15884 667 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 NMBRP28336 390 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SOAT1P35610 550 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 TLE2Q04725 743 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 KHDC1Q4VXA5 237 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SPANXN2Q5MJ10 180 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 RRM2BQ7LG56 351 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 UMODL1-AS1Q8N2C9 162 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SCAMP5Q8TAC9 235 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ZNF461Q8TAF7 563 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 IGSF21Q96ID5 467 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PRICKLE1Q96MT3 831 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 HEPHQ9BQS7 1158 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 BDH2Q9BUT1 245 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ZNF304Q9HCX3 659 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 QPCTLQ9NXS2 382 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ZNF224Q9NZL3 707 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 NEDD8-MDP1E9PL57 170 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 STK25O00506 426 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 ALDH1A2O94788 518 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 FKBP9O95302 570 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PBLDP30039 288 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 GPR1P46091 355 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CDK9P50750 372 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 BOP1Q14137 746 aaKnown RBP8.64□□□□□ -1.03
PDE6A-204ENST00000613228 MS4A13Q5J8X5 152 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 LDLRAP1Q5SW96 308 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 PM20D1Q6GTS8 502 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 FKBP9P1Q75LS8 142 aa8.64□□□□□ -1.03
PDE6A-204ENST00000613228 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms