RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FAM50BQ9Y247 325 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 DNMT3AQ9Y6K1 912 aaPredicted RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 USH1CQ9Y6N9 552 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 COL4A3Q01955 1670 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 ATXN2Q99700 1313 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 SPTBN5Q9NRC6 3674 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CCT8L1PA6NM43 557 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 E5RI56 91 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 F8W8V4 182 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 H0Y858 1186 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 PSMD11O00231 422 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ITM2AO43736 263 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DLX3O60479 287 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 KIAA0754O94854 1291 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 EPHX1P07099 455 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TFEBP19484 476 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CHRM3P20309 590 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CA5AP35218 305 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 MMP12P39900 470 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 RGS19P49795 217 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DCDC1P59894 354 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 DNAJB13P59910 316 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ATP6V0D1P61421 351 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 PFKPQ01813 784 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ELP6Q0PNE2 266 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ENPP2Q13822 863 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 POM121L1PQ3SYA9 428 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 EGFLAMQ63HQ2 1017 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 PTRHD1Q6GMV3 140 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 FBXL19Q6PCT2 694 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 NAPRTQ6XQN6 538 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 RFLNAQ6ZTI6 216 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TRPM8Q7Z2W7 1104 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 HSD11B1LQ7Z5J1 315 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SLC22A9Q8IVM8 553 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 MICALL1Q8N3F8 863 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 RHEBL1Q8TAI7 183 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 C10orf82Q8WW14 230 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 FAM136AQ96C01 138 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 THOC1Q96FV9 657 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 SCARF2Q96GP6 870 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 GAS2L1Q99501 681 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 P2RY13Q9BPV8 354 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SIKE1Q9BRV8 207 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 UNKQ9C0B0 810 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 DERL2Q9GZP9 239 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 FAM83DQ9H4H8 585 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TFB2MQ9H5Q4 396 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 ZNF395Q9H8N7 513 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 FBRSL1Q9HCM7 1045 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 PRSS16Q9NQE7 514 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ZDHHC3Q9NYG2 299 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 NFKBIL1Q9UBC1 381 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 TRMT6Q9UJA5 497 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 GNPTGQ9UJJ9 305 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 HCN2Q9UL51 889 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TNRC18O15417 2968 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 MUC22E2RYF6 1773 aaPredicted RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 SZT2Q5T011 3432 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CCDC189A1A4V9 331 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 C1QTNF3-AMACRE9PGA6 284 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ZBTB14O43829 449 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 NIPSNAP2O75323 286 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 SNUPNO95149 360 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 ELFN1P0C7U0 828 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SERPINB5P36952 375 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 NSG1P42857 185 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SOX9P48436 509 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CLCN7P51798 805 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ARFIP2P53365 341 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 NAGLUP54802 743 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 IL2P60568 153 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 RALGDSQ12967 914 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 AAK1Q2M2I8 961 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ATP13A5Q4VNC0 1218 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 FAM46CQ5VWP2 391 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 LIPIQ6XZB0 460 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 MACC1Q6ZN28 852 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CCDC121Q6ZUS5 278 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 Q6ZVL8 140 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TECPR1Q7Z6L1 1165 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 WDR75Q8IWA0 830 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 NRSN1Q8IZ57 195 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 TRAM1L1Q8N609 369 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SIDT2Q8NBJ9 832 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 RFWD2Q8NHY2 731 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 STAG3L4Q8TBR4 150 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 PIWIL2Q8TC59 973 aaKnown RBP8.82□□□□□ -1
CCDC47-207ENST00000612558 CD200R1Q8TD46 325 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 CCT6BQ92526 530 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 INPP5DQ92835 1189 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 KIAA1191Q96A73 305 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ARRDC3Q96B67 414 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 PTERQ96BW5 349 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 SGF29Q96ES7 293 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 RMDN2Q96LZ7 410 aa8.82□□□□□ -1
CCDC47-207ENST00000612558 ACOX2Q99424 681 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms