RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GRIK2Q13002 908 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 FUT11Q495W5 492 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 HECTD3Q5T447 861 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
NEK3-206ENST00000611833 GPRIN3Q6ZVF9 776 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 NPAS4Q8IUM7 802 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 CBR4Q8N4T8 237 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 RMND5BQ96G75 393 aaPredicted RBP17.07■□□□□ 0.32
NEK3-206ENST00000611833 TEX37Q96LM6 180 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 C1orf50Q9BV19 199 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 ANKRD60Q9BZ19 345 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 THEGQ9P2T0 379 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 ZNF225Q9UK10 706 aa17.07■□□□□ 0.32
NEK3-206ENST00000611833 TSPAN12O95859 305 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 PRR35P0CG20 571 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 UGT1A6P19224 532 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 OR1D2P34982 312 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 UFM1P61960 85 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 RCAN2Q14206 197 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 SPATS1Q496A3 300 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 RABL3Q5HYI8 236 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 NHSL2Q5HYW2 709 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 CPNE9Q8IYJ1 553 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 GOLM1Q8NBJ4 401 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 TMEM125Q96AQ2 219 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 ALG2Q9H553 416 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 DUS2Q9NX74 493 aaKnown RBP17.06■□□□□ 0.32
NEK3-206ENST00000611833 SUN2Q9UH99 717 aa17.06■□□□□ 0.32
NEK3-206ENST00000611833 EIF2B4Q9UI10 523 aaKnown RBP17.06■□□□□ 0.32
NEK3-206ENST00000611833 A0A0U1RQS6 177 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 RNF103-CHMP3A0A140T963 221 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 H3BNH8 94 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 INPP4BO15327 924 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 SPATA31D3P0C874 917 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 IRF1P10914 325 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 HK3P52790 923 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 CYP51A1Q16850 503 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 XKR7Q5GH72 579 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 SLC8B1Q6J4K2 584 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 SPATA31D4Q6ZUB0 917 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 PACRGLQ8N7B6 248 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 CDYL2Q8N8U2 506 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 DCBLD1Q8N8Z6 715 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 CD200R1Q8TD46 325 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 WBP2Q969T9 261 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 HIC2Q96JB3 615 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 AGPAT4Q9NRZ5 378 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 OLAHQ9NV23 265 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 TMCO1Q9UM00 188 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 A0A1B0GVM2 712 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 PDLIM1O00151 329 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 PLOD2O00469 737 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 OR4F21O95013 312 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 CD160O95971 181 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 HMGA1P17096 107 aaKnown RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 SOX11P35716 441 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 GSK3BP49841 420 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 POLR2JP52435 117 aaKnown RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 ERVK-8P63133 956 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 ARF5P84085 180 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 LIPEQ05469 1076 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 AARS2Q5JTZ9 985 aaKnown RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 PAGE3Q5JUK9 113 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 INTS11Q5TA45 600 aaKnown RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 FAM47BQ8NA70 645 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 FNDC5Q8NAU1 212 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 PDZD8Q8NEN9 1154 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 CD99L2Q8TCZ2 262 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 TFAP2CQ92754 450 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 PLD4Q96BZ4 506 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 TMEM175Q9BSA9 504 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 RNF38Q9H0F5 515 aa17.05■□□□□ 0.32
NEK3-206ENST00000611833 LEF1Q9UJU2 399 aaPredicted RBP17.05■□□□□ 0.32
NEK3-206ENST00000611833 A0A1B0GVG6 124 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 H3BSA7 217 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 SYNCRIPO60506 623 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 EEDO75530 441 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 GPIP06744 558 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 ZNF23P17027 643 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 OXTRP30559 389 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 TWF1Q12792 350 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 TRAF2Q12933 501 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 CXorf57Q6NSI4 855 aaKnown RBP17.04■□□□□ 0.32
NEK3-206ENST00000611833 BORAQ6PGQ7 559 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 ADGRG5Q8IZF4 528 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 OR2T11Q8NH01 316 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 RAET1EQ8TD07 263 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 KCNJ9Q92806 393 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 C9orf16Q9BUW7 83 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 MUC13Q9H3R2 512 aa17.04■□□□□ 0.32
NEK3-206ENST00000611833 MTRRQ9UBK8 725 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms