RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CARNS1A5YM72 827 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 LRRC14BA6NHZ5 514 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 PPP6CO00743 305 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GSRP00390 522 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TLE2Q04725 743 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TNK2Q07912 1038 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 INO80DQ53TQ3 878 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 C6orf136Q5SQH8 315 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 B3GNT6Q6ZMB0 384 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 LYSMD3Q7Z3D4 306 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 P3H2Q8IVL5 708 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 LSMEM2Q8N112 164 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GRIN3AQ8TCU5 1115 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SLC13A3Q8WWT9 602 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 APOLD1Q96LR9 279 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SEZ6LQ9BYH1 1024 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 RIMKLBQ9ULI2 386 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 POLR3HQ9Y535 204 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 ANXA6P08133 673 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UGT1A6P19224 532 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CYP2A7P20853 494 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UGT1A1P22309 533 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UGT1A4P22310 534 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ADRA1AP35348 466 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UGT1A3P35503 534 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UGT1A5P35504 534 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 HMGCLP35914 325 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 GPR33Q49SQ1 333 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CES4AQ5XG92 561 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 AADATQ8N5Z0 425 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZNF557Q8N988 423 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 KLHDC9Q8NEP7 349 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TSPEARQ8WU66 669 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 MPP4Q96JB8 637 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CHID1Q9BWS9 393 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SMPD3Q9NY59 655 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 AP3M1Q9Y2T2 418 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 MYH11P35749 1972 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 KPNA3O00505 521 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 ARNTP27540 789 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CDKN2DP55273 166 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TGFBIQ15582 683 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GCNT7Q6ZNI0 430 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 DCAF4L2Q8NA75 395 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TRPV3Q8NET8 790 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZNF711Q9Y462 761 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 LRRC37AA6NMS7 1700 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 UBR3Q6ZT12 1888 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GNG14A0A1W2PPG7 69 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SORBS2O94875 1100 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SLC6A2P23975 617 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CST5P28325 142 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 GGT5P36269 586 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 RPS9P46781 194 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 GATMP50440 423 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CLCN2P51788 898 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 NEDD8Q15843 81 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZIK1Q3SY52 487 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 ARHGAP15Q53QZ3 475 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 OGFRL1Q5TC84 451 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 MANEALQ5VSG8 457 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 PSAPL1Q6NUJ1 521 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CCDC149Q6ZUS6 474 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ERMP1Q7Z2K6 904 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GPR78Q96P69 363 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 C1QTNF1Q9BXJ1 281 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 DYRK4Q9NR20 520 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 OSER1Q9NX31 292 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 C3orf18Q9UK00 162 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SPO11Q9Y5K1 396 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 PRORSD1PA6NEY8 169 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZNF195O14628 629 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ARPC2O15144 300 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 IGLV3-25P01717 112 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 HOXD9P28356 352 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 KCNC1P48547 511 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 PGFP49763 221 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 INHBCP55103 352 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 EEFSECP57772 596 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 SH3BP2P78314 561 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 GRIK2Q13002 908 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZNF423Q2M1K9 1284 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 CWF19L1Q69YN2 538 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 RALGPS2Q86X27 583 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 MICU2Q8IYU8 434 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 IGSF21Q96ID5 467 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 RPL10LQ96L21 214 aaKnown RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 LRRC3Q9BY71 257 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 MUC13Q9H3R2 512 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 ZDHHC6Q9H6R6 413 aa6.31□□□□□ -1.4
SNX13-213ENST00000611725 SDR39U1Q9NRG7 319 aaPredicted RBP6.31□□□□□ -1.4
SNX13-213ENST00000611725 LOC285095A0A1B0GVY8 99 aa6.3□□□□□ -1.4
SNX13-213ENST00000611725 OR1I1O60431 355 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms