RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FAM153AQ9UHL3 310 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 ALG6Q9Y672 507 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 SLC30A1Q9Y6M5 507 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 BOD1L1Q8NFC6 3051 aa7.51□□□□□ -1.21
CUX1-219ENST00000606749 CFAP46Q8IYW2 2715 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 LOC101059948A0A1B0GTJ6 334 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 LILRA5A6NI73 299 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 AKR1B15C9JRZ8 316 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 PYCARD-AS1I3L0S3 204 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 SUV39H1O43463 412 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 UBXN7O94888 489 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 ZRANB2O95218 330 aaKnown RBP eCLIP7.5□□□□□ -1.21
CUX1-219ENST00000606749 VIPP01282 170 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 C9P02748 559 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 BRAFP15056 766 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 PECAM1P16284 738 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 TYRP1P17643 537 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 AMD1P17707 334 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 RPL10P27635 214 aaKnown RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 MAGEA1P43355 309 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 HADHBP55084 474 aaKnown RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 KCNC4Q03721 635 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 NOMO1Q15155 1222 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 INSCQ1MX18 579 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 ATP13A5Q4VNC0 1218 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 TFDP3Q5H9I0 405 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 SIRPB2Q5JXA9 342 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 KAZNQ674X7 775 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 BORAQ6PGQ7 559 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 KDELC1Q6UW63 502 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 CEACAM20Q6UY09 585 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 WASH2PQ6VEQ5 465 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 PID1Q7Z2X4 250 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 ZC3H18Q86VM9 953 aaKnown RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 CNGA4Q8IV77 575 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 NLGN4XQ8N0W4 816 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 TTC30BQ8N4P2 665 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 DTX3LQ8TDB6 740 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 BRSK1Q8TDC3 778 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 P3H4Q92791 437 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 SLC45A3Q96JT2 553 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 MRGPRX2Q96LB1 330 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 C9orf72Q96LT7 481 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 VPS35Q96QK1 796 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 FCRL5Q96RD9 977 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 TIMM29Q9BSF4 260 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 SLC25A18Q9H1K4 315 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 TRABDQ9H4I3 376 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 APMAPQ9HDC9 416 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 SLC40A1Q9NP59 571 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 IL26Q9NPH9 171 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 WASH6PQ9NQA3 447 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 GEMIN8Q9NWZ8 242 aaKnown RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 KLHL3Q9UH77 587 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 DNAJC16Q9Y2G8 782 aa7.5□□□□□ -1.21
CUX1-219ENST00000606749 TMEM184BQ9Y519 407 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 HEMK1Q9Y5R4 338 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 MN1Q10571 1320 aaPredicted RBP7.5□□□□□ -1.21
CUX1-219ENST00000606749 HELZ2Q9BYK8 2649 aaKnown RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 ZNF891A8MT65 544 aaPredicted RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 PDZK1P1A8MUH7 402 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 POLR1CO15160 346 aaPredicted RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 TOX3O15405 576 aaPredicted RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 NKX2-8O15522 239 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 MTSS1O43312 755 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 PSTPIP1O43586 416 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A9O60656 530 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 STK17BO94768 372 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 WISP1O95388 367 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ANKRD34CP0C6C1 535 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A6P19224 532 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 NFKB1P19838 968 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 IDSP22304 550 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A1P22309 533 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UGT1A4P22310 534 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 CA5AP35218 305 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 CHRNA4P43681 627 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 GFERP55789 205 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 NFKB2Q00653 900 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ABHD18Q0P651 414 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 SLC1A5Q15758 541 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 CHRNA6Q15825 494 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 SEPT7Q16181 437 aaKnown RBP7.49□□□□□ -1.21
CUX1-219ENST00000606749 AGAP9Q5VTM2 703 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ZDHHC20Q5W0Z9 365 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 C11orf96Q7Z7L8 435 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TRIM48Q8IWZ4 208 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 KATNAL2Q8IYT4 538 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 UNC5BQ8IZJ1 945 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 ZNF567Q8N184 647 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 SLC25A41Q8N5S1 370 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 TC2NQ8N9U0 490 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 GDAP1Q8TB36 358 aa7.49□□□□□ -1.21
CUX1-219ENST00000606749 OXNAD1Q96HP4 312 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms