RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 POM121BA6NF01 834 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 H0Y8X5 98 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 H3BM21 787 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 RAD51BO15315 384 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 RFPL1O75677 317 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 ASMTLO95671 621 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 HOXC4P09017 264 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 SPRP35270 261 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 BLKP51451 505 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 NXPH1P58417 271 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 KIAA1024LP59773 190 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PFN3P60673 137 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 IL9RQ01113 521 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 GRIK2Q13002 908 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 MSLNQ13421 630 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 BMPR2Q13873 1038 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PDE1CQ14123 709 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 INPP5AQ14642 412 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 NFATC4Q14934 902 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PTPRRQ15256 657 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 CCDC6Q16204 474 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 HENMT1Q5T8I9 393 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 TEDDM1Q5T9Z0 273 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 MACC1Q6ZN28 852 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PRR23CQ6ZRP0 262 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 ZNF771Q7L3S4 317 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 ASCL5Q7RTU5 278 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PARGQ86W56 976 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 TTC30BQ8N4P2 665 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 OR13H1Q8NG92 308 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 OR4K2Q8NGD2 314 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 MGARPQ8TDB4 240 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 DTX3LQ8TDB6 740 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 BCAS4Q8TDM0 211 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 STYXQ8WUJ0 223 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 CKAP2Q8WWK9 683 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.99□□□□□ -0.812e-7■■■■■ 62.8
UPF1-213ENST00000601981 ISL2Q96A47 359 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 CHMP6Q96FZ7 201 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 RBBP8Q99708 897 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 APOOQ9BUR5 198 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 RIOK2Q9BVS4 552 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 GTPBP2Q9BX10 602 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 MBNL1Q9NR56 388 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 IL17CQ9P0M4 197 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 RIMKLBQ9ULI2 386 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 CA5BQ9Y2D0 317 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 ARL5AQ9Y689 179 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 DMXL1Q9Y485 3027 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 LRP4O75096 1905 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 PLXNB3Q9ULL4 1909 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 A0A0U1RQS6 177 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 HMX2A2RU54 273 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MROH6A6NGR9 719 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PATE3B3GLJ2 98 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 COPEO14579 308 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 AURKAO14965 403 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 FAM107AO95990 144 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ITGA2BP08514 1039 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PYGBP11216 843 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MYCLP1P12525 358 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 BPIP17213 487 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ENGP17813 658 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 GM2AP17900 193 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ITGALP20701 1170 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 RPA3P35244 121 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 TRIM23P36406 574 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 CTSKP43235 329 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MAGEA12P43365 314 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ARCN1P48444 511 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 ZNF140P52738 457 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 LIMK2P53671 638 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 WDR4P57081 412 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 IRX4P78413 519 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 FOXK2Q01167 660 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ILF2Q12905 390 aaKnown RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 KIF19Q2TAC6 998 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 HSP90AA5PQ58FG0 334 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 TSTD2Q5T7W7 516 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MROH9Q5TGP6 573 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ADAMTSL4Q6UY14 1074 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 HEATR4Q86WZ0 1026 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 PHYKPLQ8IUZ5 450 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 GABPB2Q8TAK5 448 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 BTN2A2Q8WVV5 523 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 SCAMP4Q969E2 229 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ULK4Q96C45 1275 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 HIC2Q96JB3 615 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 BMFQ96LC9 184 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MAGEB18Q96M61 343 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ZNF778Q96MU6 729 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 WDR92Q96MX6 357 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 ZNF317Q96PQ6 595 aaPredicted RBP9.98□□□□□ -0.81
UPF1-213ENST00000601981 CCT8L2Q96SF2 557 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 TTC1Q99614 292 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 FAM167BQ9BTA0 163 aa9.98□□□□□ -0.81
UPF1-213ENST00000601981 MCMBPQ9BTE3 642 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms