RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 B4DGG1 531 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 KMOO15229 486 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 STX7O15400 261 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZSCAN12O43309 604 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 BUD23O43709 281 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CDK14O94921 469 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 PRAMEF1O95521 474 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CRTAMO95727 393 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 GOLGA6DP0CG33 693 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 BRAFP15056 766 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF7P17097 686 aaPredicted RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CD1CP29017 333 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 HADHAP40939 763 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ACTR1BP42025 376 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 LSSP48449 732 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CTSCP53634 463 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 MAZP56270 477 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ACTR1AP61163 376 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CCL7P80098 99 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CDK16Q00536 496 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CDH17Q12864 832 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 GPR33Q49SQ1 333 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 BCL7AQ4VC05 210 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 LDLRAP1Q5SW96 308 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ARMC3Q5W041 872 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 PAPD7Q5XG87 772 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 DOK6Q6PKX4 331 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 SLC30A9Q6PML9 568 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 FAM151BQ6UXP7 276 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 C4orf22Q6V702 233 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF534Q76KX8 674 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 MARK2Q7KZI7 788 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 PRUNE1Q86TP1 453 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 LINC00523Q86TU6 105 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 NXPE1Q8N323 547 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 SLC35F6Q8N357 371 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 RASGEF1AQ8N9B8 481 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 OR13J1Q8NGT2 312 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF398Q8TD17 642 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 SLC37A2Q8TED4 501 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 COG1Q8WTW3 980 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 STYXQ8WUJ0 223 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CDKN2AIPNLQ96HQ2 116 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 MS4A14Q96JA4 679 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 DNAJC1Q96KC8 554 aaKnown RBP8.66□□□□□ -1.02
SSBP4-208ENST00000600628 DEPDC7Q96QD5 511 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 LRRN3Q9H3W5 708 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 DPEP2Q9H4A9 486 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 GOLGA6AQ9NYA3 693 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 LRIT1Q9P2V4 623 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNHIT2Q9UHR6 403 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 FKBPLQ9UIM3 349 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 SNX12Q9UMY4 172 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF148Q9UQR1 794 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 RAXQ9Y2V3 346 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 PCDHGA8Q9Y5G5 932 aa8.66□□□□□ -1.02
SSBP4-208ENST00000600628 CACNA1GO43497 2377 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ADAMTS20P59510 1910 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 IGHV1OR21-1A0A087WYE8 117 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KIR2DS5A0A0G2JLQ3 304 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 A0A0G2JNG1 304 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KLHL33A6NCF5 533 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 OR5K4A6NMS3 321 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 CDRT15L2A8MXV6 281 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KIR2DS3K7RE56 304 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 CEP104O60308 925 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 CSO75390 466 aaKnown RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 MTX2O75431 263 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ASMTLO95671 621 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ZSCAN5DPP0CG00 497 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 TPSB2P20231 275 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 FOXN2P32314 431 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 MAGEA3P43357 314 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 TNNT3P45378 269 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KCNJ1P48048 391 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ARSDP51689 593 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 SNX1Q13596 522 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KCNJ11Q14654 390 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 KIR2DS5Q14953 304 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 TPSAB1Q15661 275 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 METRNLQ641Q3 311 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 RBM44Q6ZP01 1051 aaKnown RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 CHST15Q7LFX5 561 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 SNX20Q7Z614 316 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 B3GNT8Q7Z7M8 397 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 LRRTM4Q86VH4 590 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 PIANPQ8IYJ0 282 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 SNIP1Q8TAD8 396 aaKnown RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 SLCO2A1Q92959 643 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF514Q96K75 400 aaPredicted RBP8.65□□□□□ -1.02
SSBP4-208ENST00000600628 ZNF778Q96MU6 729 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 OSBPL9Q96SU4 736 aa8.65□□□□□ -1.02
SSBP4-208ENST00000600628 TWSG1Q9GZX9 223 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms