RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ZSCAN1Q8NBB4 408 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 NCSTNQ92542 709 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 OXNAD1Q96HP4 312 aaPredicted RBP15.58■□□□□ 0.08
VRK3-221ENST00000600284 TEFMQ96QE5 360 aaKnown RBP15.58■□□□□ 0.08
VRK3-221ENST00000600284 ZMYND15Q9H091 742 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 BPIFA1Q9NP55 256 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 IL26Q9NPH9 171 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 WASH6PQ9NQA3 447 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 WDR70Q9NW82 654 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 SLC39A1Q9NY26 324 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 IL17CQ9P0M4 197 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 SLC23A2Q9UGH3 650 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 TFR2Q9UP52 801 aa15.58■□□□□ 0.08
VRK3-221ENST00000600284 CCDC66A2RUB6 948 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 ZNF189O75820 626 aaPredicted RBP15.57■□□□□ 0.08
VRK3-221ENST00000600284 ANXA9O76027 345 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 ITGB2P05107 769 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 VCLP18206 1134 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 SPAM1P38567 509 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 CETN2P41208 172 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 PPM1FP49593 454 aaPredicted RBP15.57■□□□□ 0.08
VRK3-221ENST00000600284 ATP1A2P50993 1020 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 NOMO1Q15155 1222 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 AGAP9Q5VTM2 703 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 KIAA1614Q5VZ46 1190 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 ITPRIPL1Q6GPH6 555 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 CRTC3Q6UUV7 619 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 GLT6D1Q7Z4J2 308 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 PLXDC1Q8IUK5 500 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 ZNF547Q8IVP9 402 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 RBM12BQ8IXT5 1001 aaKnown RBP15.57■□□□□ 0.08
VRK3-221ENST00000600284 ART4Q93070 314 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 HAUS1Q96CS2 278 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 TTC25Q96NG3 672 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 ZPBPQ9BS86 351 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 HEMGNQ9BXL5 484 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 OSGEPL1Q9H4B0 414 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 OCIAD1Q9NX40 245 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 RSPH14Q9UHP6 348 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 TMPRSS11EQ9UL52 423 aa15.57■□□□□ 0.08
VRK3-221ENST00000600284 DNMT3AQ9Y6K1 912 aaPredicted RBP15.57■□□□□ 0.08
VRK3-221ENST00000600284 SOWAHDA6NJG2 315 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 EFCAB7A8K855 629 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 H7C0C1 242 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 MTX2O75431 263 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 VIPP01282 170 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 IDSP22304 550 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 CTNNA2P26232 953 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 RBL1P28749 1068 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 ATP5OP48047 213 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 ARSDP51689 593 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 GEMP55040 296 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 RWDD2BP57060 319 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 MC2RQ01718 297 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 ITGA9Q13797 1035 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 GTF2H3Q13889 308 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 LDLRAP1Q5SW96 308 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 CCDC181Q5TID7 509 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 TMEM26Q6ZUK4 368 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 C11orf96Q7Z7L8 435 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 ZNF605Q86T29 641 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 FAM129CQ86XR2 697 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 SLC25A41Q8N5S1 370 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 BMPERQ8N8U9 685 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 IPMKQ8NFU5 416 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 GDAP1Q8TB36 358 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 BLOC1S5Q8TDH9 187 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 NKD1Q969G9 470 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 MED8Q96G25 268 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 FSD1LQ9BXM9 530 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 ZCCHC2Q9C0B9 1178 aaKnown RBP15.56■□□□□ 0.08
VRK3-221ENST00000600284 GBA3Q9H227 469 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 FBXO8Q9NRD0 319 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 POT1Q9NUX5 634 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 SCHIP1Q9P0W5 487 aaPredicted RBP15.56■□□□□ 0.08
VRK3-221ENST00000600284 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
VRK3-221ENST00000600284 PKP3Q9Y446 797 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 B3GALT1Q9Y5Z6 326 aa15.56■□□□□ 0.08
VRK3-221ENST00000600284 KALRNO60229 2985 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 MN1Q10571 1320 aaPredicted RBP15.55■□□□□ 0.08
VRK3-221ENST00000600284 GLYATL1P3A0A0U1RQE8 302 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 RCCD1A6NED2 376 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 TOX3O15405 576 aaPredicted RBP15.55■□□□□ 0.08
VRK3-221ENST00000600284 PJA2O43164 708 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 ANKRD34CP0C6C1 535 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 SLC19A1P41440 591 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 CHRNA4P43681 627 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 NAP1L1P55209 391 aaKnown RBP15.55■□□□□ 0.08
VRK3-221ENST00000600284 KHDC1Q4VXA5 237 aaKnown RBP15.55■□□□□ 0.08
VRK3-221ENST00000600284 SNAP47Q5SQN1 464 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 RANBP10Q6VN20 620 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 CDKL3Q8IVW4 592 aaPredicted RBP15.55■□□□□ 0.08
VRK3-221ENST00000600284 TRIM48Q8IWZ4 208 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 DDHD1Q8NEL9 900 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 ACTL9Q8TC94 416 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 PPP1R2P1Q96PQ5 205 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 TBC1D10AQ9BXI6 508 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 OSBPL8Q9BZF1 889 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 SMOXQ9NWM0 555 aa15.55■□□□□ 0.08
VRK3-221ENST00000600284 ZNF624Q9P2J8 865 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms