RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 ATXN7O15265 892 aaPredicted RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 KCNN4O15554 427 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 EFSO43281 561 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 PRAMEF10O60809 474 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 FGF3P11487 239 aaPredicted RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 XRCC1P18887 633 aaPredicted RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 CSF2RBP32927 897 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 ADRA1AP35348 466 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 PRPSAP1Q14558 356 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 PTPRCAPQ14761 206 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 TGIF1Q15583 401 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 TMEM164Q5U3C3 297 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 CRTC3Q6UUV7 619 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 PEX26Q7Z412 305 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 GLT6D1Q7Z4J2 308 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 ZFAND4Q86XD8 727 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 ZNF547Q8IVP9 402 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 SPC24Q8NBT2 197 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 GDAP1Q8TB36 358 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 BRSK1Q8TDC3 778 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 SNRNP27Q8WVK2 155 aaKnown RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 NCSTNQ92542 709 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 FICDQ9BVA6 458 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 FSD1LQ9BXM9 530 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 B3GNT4Q9C0J1 378 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 STN1Q9H668 368 aaKnown RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 SCHIP1Q9P0W5 487 aaPredicted RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 TRIM10Q9UDY6 481 aa14.86□□□□□ -0.03
LIG1-215ENST00000597901 AAR2Q9Y312 384 aaKnown RBP14.86□□□□□ -0.03
LIG1-215ENST00000597901 GLYATL1P3A0A0U1RQE8 302 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 PRR19A6NJB7 356 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 STX7O15400 261 aaKnown RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 STK10O94804 968 aaKnown RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 THRAP10827 490 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 CDC25BP30305 580 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 CSTF2P33240 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
LIG1-215ENST00000597901 CA5AP35218 305 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 SPAM1P38567 509 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 SLC19A1P41440 591 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 PPM1FP49593 454 aaPredicted RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 INSCQ1MX18 579 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 TAF1BQ53T94 588 aaPredicted RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 WDR74Q6RFH5 385 aaPredicted RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 CCDC81Q6ZN84 652 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 SYCE1Q8N0S2 351 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 TXLNBQ8N3L3 684 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 AGBL5Q8NDL9 886 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 CCDC110Q8TBZ0 833 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 ZNF398Q8TD17 642 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 TTC25Q96NG3 672 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 TAAR9Q96RI9 348 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 CCNL2Q96S94 520 aaPredicted RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 TIMM29Q9BSF4 260 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 DESI2Q9BSY9 194 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 OSGEPL1Q9H4B0 414 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 WDR70Q9NW82 654 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 FOXJ2Q9P0K8 574 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 ZNF624Q9P2J8 865 aaPredicted RBP14.85□□□□□ -0.03
LIG1-215ENST00000597901 DNAJC16Q9Y2G8 782 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 PKP3Q9Y446 797 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 NBEAQ8NFP9 2946 aa14.85□□□□□ -0.03
LIG1-215ENST00000597901 A8MU76 341 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 MIF4GDA9UHW6 222 aaKnown RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 K7ENP7 123 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 DDX3YO15523 660 aaKnown RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 DUX1O43812 170 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 PPFIA2O75334 1257 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 POP7O75817 140 aaKnown RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 LPOP22079 712 aaPredicted RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 IDSP22304 550 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 PSMB4P28070 264 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 UBE2IP63279 158 aaKnown RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 MSLNQ13421 630 aaPredicted RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 OLIG2Q13516 323 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 GTF2H3Q13889 308 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 PLA2G4EQ3MJ16 856 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 INO80CQ6PI98 192 aaPredicted RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 FAM151BQ6UXP7 276 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 WASH2PQ6VEQ5 465 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 ARHGAP22Q7Z5H3 698 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 C11orf96Q7Z7L8 435 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 UBL4BQ8N7F7 174 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 RASGEF1AQ8N9B8 481 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 AVL9Q8NBF6 648 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 SPATA13Q96N96 652 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 APOL2Q9BQE5 337 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 TBC1D10AQ9BXI6 508 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 WASH6PQ9NQA3 447 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 OCIAD1Q9NX40 245 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 PACSIN2Q9UNF0 486 aaPredicted RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 KCTD3Q9Y597 815 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 PCDHGA3Q9Y5H0 932 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 ARL5AQ9Y689 179 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 ARHGEF17Q96PE2 2063 aaPredicted RBP14.84□□□□□ -0.03
LIG1-215ENST00000597901 UNC13CQ8NB66 2214 aa14.84□□□□□ -0.03
LIG1-215ENST00000597901 ATRXP46100 2492 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 C5orf60A6NFR6 353 aa14.83□□□□□ -0.04
LIG1-215ENST00000597901 C2orf81A6NN90 581 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms