RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 C9orf72Q96LT7 481 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 TGM7Q96PF1 710 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 ZSCAN5AQ9BUG6 496 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 ADGRE3Q9BY15 652 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 GPR63Q9BZJ6 419 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 TRIM39Q9HCM9 518 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 BPIFA1Q9NP55 256 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 FBXO8Q9NRD0 319 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 UBP1Q9NZI7 540 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
SOX2-OT-228ENST00000597828 PCSK5Q92824 1860 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 RGSL1A5PLK6 1076 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 PRR19A6NJB7 356 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 PDZK1P1A8MUH7 402 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 GOLGA6L19H0YKK7 550 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 CHUKO15111 745 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 VIPP01282 170 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 C9P02748 559 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 TMEM253P0C7T8 217 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 TNNT1P13805 278 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 ZNF7P17097 686 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 MAP4P27816 1152 aaKnown RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 HNRNPH3P31942 346 aaKnown RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 CA5AP35218 305 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 STAT5AP42229 794 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 CLCNKAP51800 687 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 DRG2P55039 364 aaKnown RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 ABHD18Q0P651 414 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 LLGL1Q15334 1064 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 LRRTM4Q86VH4 590 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 RFX6Q8HWS3 928 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 TRIM48Q8IWZ4 208 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 GPR150Q8NGU9 434 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 SLC35G2Q8TBE7 412 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 KIAA1143Q96AT1 154 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 TADA1Q96BN2 335 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 CHP1Q99653 195 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 SLC25A51Q9H1U9 297 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 NFKBIL1Q9UBC1 381 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 SAE1Q9UBE0 346 aaPredicted RBP11.91□□□□□ -0.5
SOX2-OT-228ENST00000597828 OR5K4A6NMS3 321 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 CAPN5O15484 640 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 PMPCBO75439 489 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 UBXN7O94888 489 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 FURINP09958 794 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 ANKRD34CP0C6C1 535 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 PECAM1P16284 738 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 XRCC1P18887 633 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 CHRNA4P43681 627 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 CDK18Q07002 472 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 GPR18Q14330 331 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 PCM1Q15154 2024 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 ATP13A5Q4VNC0 1218 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 FAM92BQ6ZTR7 304 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 C11orf96Q7Z7L8 435 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 PLXDC1Q8IUK5 500 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 GALNT6Q8NCL4 622 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 C9orf43Q8TAL5 461 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 IQCDQ96DY2 449 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 CATSPER2Q96P56 530 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 OR6C1Q96RD1 312 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 ULBP3Q9BZM4 244 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 TSPY26PQ9H489 355 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 DEF6Q9H4E7 631 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 GLOD4Q9HC38 313 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 MAGEE1Q9HCI5 957 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 WDR37Q9Y2I8 494 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 RPS6KL1Q9Y6S9 549 aa11.9□□□□□ -0.5
SOX2-OT-228ENST00000597828 SEC16AO15027 2179 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 FLNCQ14315 2725 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 A0A0A6YYK5 440 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 K7EM74 188 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 KMOO15229 486 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 RASSF9O75901 435 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 KIAA0754O94854 1291 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 CDK14O94921 469 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TIAF1O95411 115 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 NDST3O95803 873 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 AMD1P17707 334 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 NFKB1P19838 968 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TCN2P20062 427 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 PTPN3P26045 913 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 CD68P34810 354 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 DLSTP36957 453 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 CAPZBP47756 277 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 PDK1Q15118 436 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 PRKD1Q15139 912 aaPredicted RBP11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 MFSD7Q6UXD7 560 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TMEM135Q86UB9 458 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 TRAPPC5Q8IUR0 188 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 NAT14Q8WUY8 206 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 ABHD17AQ96GS6 310 aa11.89□□□□□ -0.51
SOX2-OT-228ENST00000597828 DNAJC7Q99615 494 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms