RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 BAG1Q99933 345 aaPredicted RBP17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 PRDM8Q9NQV8 689 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 CPNE7Q9UBL6 633 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 SLC23A2Q9UGH3 650 aa17.68■□□□□ 0.42
CHMP2A-203ENST00000597209 LILRA5A6NI73 299 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 TJP3O95049 919 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 RBP3P10745 1247 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 FGF3P11487 239 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 CSTF2P33240 577 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 TMEM115Q12893 351 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 INSCQ1MX18 579 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 PCSK4Q6UW60 755 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 ABRAXAS1Q6UWZ7 409 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 WASH2PQ6VEQ5 465 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 RANBP10Q6VN20 620 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 GLT6D1Q7Z4J2 308 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 ARHGAP22Q7Z5H3 698 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF761Q86XN6 746 aaPredicted RBP17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 TMEM139Q8IV31 216 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF547Q8IVP9 402 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 CCDC112Q8NEF3 446 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 BLOC1S5Q8TDH9 187 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 PPP1R2P1Q96PQ5 205 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 GORASP1Q9BQQ3 440 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 FSD1LQ9BXM9 530 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 WASH6PQ9NQA3 447 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 FOXJ2Q9P0K8 574 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 TMEM9Q9P0T7 183 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 IMPACTQ9P2X3 320 aa17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 AAR2Q9Y312 384 aaKnown RBP17.67■□□□□ 0.42
CHMP2A-203ENST00000597209 GRID2IPA4D2P6 1211 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 B4E171 279 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 F5H423 210 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 EFSO43281 561 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 MTX2O75431 263 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 PYGMP11217 842 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ADRA1AP35348 466 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 TSPAN7P41732 249 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 EIF3EP60228 445 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 NFATC2Q13469 925 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ITGA9Q13797 1035 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 GTF2H3Q13889 308 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 KHDC1Q4VXA5 237 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ANKRD20A2Q5SQ80 823 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 LDLRAP1Q5SW96 308 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ANKRD20A1Q5TYW2 823 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 AGAP9Q5VTM2 703 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ANKRD20A3Q5VUR7 823 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 CRTC3Q6UUV7 619 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 C11orf96Q7Z7L8 435 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 KIAA1328Q86T90 577 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 TTC9Q92623 222 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ALG3Q92685 438 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 DDA1Q9BW61 102 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 C10orf88Q9H8K7 445 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 SMOXQ9NWM0 555 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 SCHIP1Q9P0W5 487 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 AMFRQ9UKV5 643 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 PKP3Q9Y446 797 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 PCDHB11Q9Y5F2 797 aa17.66■□□□□ 0.42
CHMP2A-203ENST00000597209 ATRXP46100 2492 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 LOC400499M0QZD8 3231 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 GLYATL1P3A0A0U1RQE8 302 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 MIF4GDA9UHW6 222 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 AGRPO00253 132 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 STK10O94804 968 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 AGTP01019 485 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 VCLP18206 1134 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 IDSP22304 550 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 MPSTP25325 297 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 CDC25BP30305 580 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 PRPSAP1Q14558 356 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 TAF1AQ15573 450 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 TGIF1Q15583 401 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 CHRNA6Q15825 494 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 ZFAND4Q86XD8 727 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 KLHDC8BQ8IXV7 354 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 SYCE1Q8N0S2 351 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 DDHD1Q8NEL9 900 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 SPATA13Q96N96 652 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 TTC25Q96NG3 672 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 C19orf43Q9BQ61 176 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 FICDQ9BVA6 458 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 ZCCHC2Q9C0B9 1178 aaKnown RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 OSGEPL1Q9H4B0 414 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 POT1Q9NUX5 634 aa17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 ZNF624Q9P2J8 865 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 DNMT3AQ9Y6K1 912 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-203ENST00000597209 C5orf60A6NFR6 353 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 GAPDHSO14556 408 aaPredicted RBP17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 STX7O15400 261 aaKnown RBP17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 KCNN4O15554 427 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 VIPP01282 170 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 SLC19A1P41440 591 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 RAB15P59190 212 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 DMPKQ09013 629 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 KIF5AQ12840 1032 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 PLA2G4EQ3MJ16 856 aa17.64■□□□□ 0.41
CHMP2A-203ENST00000597209 TMEM26Q6ZUK4 368 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms