RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CRTAMO95727 393 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF7P17097 686 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 PSMA3P25788 255 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 FASLGP48023 281 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 CLCNKAP51800 687 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 OR1D5P58170 312 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 TMPRSS15P98073 1019 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 NFATC2Q13469 925 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ITGA9Q13797 1035 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 SPIDRQ14159 915 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 LDLRAP1Q5SW96 308 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 IYDQ6PHW0 289 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 XKR5Q6UX68 686 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 LRRTM4Q86VH4 590 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 WDR48Q8TAF3 677 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 GDAP1Q8TB36 358 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF398Q8TD17 642 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 COG1Q8WTW3 980 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 GFM1Q96RP9 751 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 C19orf43Q9BQ61 176 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 TIMM29Q9BSF4 260 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 ASB8Q9H765 288 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 PRDM8Q9NQV8 689 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 RAB6BQ9NRW1 208 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 KLC4Q9NSK0 619 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 NLE1Q9NVX2 485 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 SCHIP1Q9P0W5 487 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 PAK5Q9P286 719 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 PYCARDQ9ULZ3 195 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 LOC400499M0QZD8 3231 aa10.83□□□□□ -0.68
SHKBP1-206ENST00000595523 SDK2Q58EX2 2172 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 TRBV5-4A0A0C4DH59 114 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC78A2IDD5 438 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 MROH6A6NGR9 719 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 H7C0S8 307 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 SGTAO43765 313 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 BRINP1O60477 761 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 SNX2O60749 519 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 MPOP05164 745 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 PRSS56P0CW18 603 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 F3P13726 295 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 BRAFP15056 766 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CDKN1CP49918 316 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 ARSDP51689 593 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 PDE1BQ01064 536 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CDH17Q12864 832 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 SEPT6Q14141 434 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 INSCQ1MX18 579 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC38Q502W7 563 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 LINC00523Q86TU6 105 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF761Q86XN6 746 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 TRAPPC5Q8IUR0 188 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CCDC89Q8N998 374 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 PRR11Q96HE9 360 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 PBKQ96KB5 322 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 OSBPL9Q96SU4 736 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 FOXP3Q9BZS1 431 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 FAM96AQ9H5X1 160 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 CASS4Q9NQ75 786 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 TTC7AQ9ULT0 858 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 DNAJC16Q9Y2G8 782 aa10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-206ENST00000595523 IGHV1OR21-1A0A087WYE8 117 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 OR2AG2A6NM03 316 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 RHPN2P1A8MT19 583 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF185O15231 689 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 FANCGO15287 622 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 TLX3O43711 291 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 APRTP07741 180 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 CD1CP29017 333 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ALDH4A1P30038 563 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 MC4RP32245 332 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 CSF2RBP32927 897 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 HADHAP40939 763 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 GPR3P46089 330 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 UBE2IP63279 158 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 GABREP78334 506 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 CFHR1Q03591 330 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZFP36L1Q07352 338 aaKnown RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 C3orf38Q5JPI3 329 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 NKAIN2Q5VXU1 208 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF574Q6ZN55 896 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 FAM83HQ6ZRV2 1179 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF534Q76KX8 674 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SNX20Q7Z614 316 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 PIANPQ8IYJ0 282 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 NXPE1Q8N323 547 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 BEND7Q8N7W2 519 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 OR13J1Q8NGT2 312 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 LRRC45Q96CN5 670 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 LIN37Q96GY3 246 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 CDKN2AIPNLQ96HQ2 116 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 ZNF778Q96MU6 729 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 NUDT22Q9BRQ3 303 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 AP1M1Q9BXS5 423 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 SEMA6CQ9H3T2 930 aa10.81□□□□□ -0.68
SHKBP1-206ENST00000595523 OSGEPL1Q9H4B0 414 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms