RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 EPHA3P29320 983 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 PPM1AP35813 382 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 CSKP41240 450 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 NEK2P51955 445 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TECRLQ5HYJ1 363 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 SEL1L3Q68CR1 1132 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 RPS27LQ71UM5 84 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 RYBPQ8N488 228 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 HJURPQ8NCD3 748 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 PEX13Q92968 403 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 PHF21BQ96EK2 531 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 UBXN10Q96LJ8 280 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 ALG9Q9H6U8 611 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 C7orf72A4D263 438 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TRIM64BA6NI03 449 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TMEM233B4DJY2 109 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 NRG2O14511 850 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 ATP5F1P24539 256 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 NFKBIAP25963 317 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 ZNF140P52738 457 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 PRKAA2P54646 552 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TRAF2Q12933 501 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 PRKAA1Q13131 559 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 RGS21Q2M5E4 152 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 ATXN7L2Q5T6C5 722 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TMEM199Q8N511 208 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 DHRS1Q96LJ7 313 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 TCF7L2Q9NQB0 619 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 NCKIPSDQ9NZQ3 722 aa16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 ARIH1Q9Y4X5 557 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-205ENST00000594973 C2orf81A6NN90 581 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 K7ERQ8 282 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 HDAC3O15379 428 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 LILRB3O75022 631 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ZMPSTE24O75844 475 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 LRG1P02750 347 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 JUNP05412 331 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 XRCC1P18887 633 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 THOP1P52888 689 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 RHOAP61586 193 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 PEX6Q13608 980 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 FAM45BPQ6NSW5 357 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 TPGS1Q6ZTW0 290 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 BHLHE22Q8NFJ8 381 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 OR6K2Q8NGY2 324 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 FAM45AQ8TCE6 357 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 TRUB1Q8WWH5 349 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ANKRD60Q9BZ19 345 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 SMG9Q9H0W8 520 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ZBP1Q9H171 429 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 BPIFA1Q9NP55 256 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 VPS51Q9UID3 782 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 SLC30A1Q9Y6M5 507 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 LTBP2Q14767 1821 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 A0A1W2PRU2 124 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ANKRD66B4E2M5 251 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 UGT1A6P19224 532 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 UGT1A1P22309 533 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 UGT1A4P22310 534 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 UGT1A3P35503 534 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 UGT1A5P35504 534 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 STC1P52823 247 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ACAP2Q15057 778 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 TAF1AQ15573 450 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 SLC14A2Q15849 920 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 Q6ZNB5 142 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 FIBCD1Q8N539 461 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 GPR150Q8NGU9 434 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 EXT2Q93063 718 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 TMEM79Q9BSE2 394 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 DCUN1D5Q9BTE7 237 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ADGRE3Q9BY15 652 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 TM6SF2Q9BZW4 377 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 ERGIC3Q9Y282 383 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
SHKBP1-205ENST00000594973 A8MT66 165 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 SLC22A2O15244 555 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 ZBTB14O43829 449 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 EFCAB14O75071 495 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 STAMBPO95630 424 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CXCL14O95715 111 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 OLFM2O95897 454 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 ME2P23368 584 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 KCNC1P48547 511 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CDKN1CP49918 316 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 NUDT2P50583 147 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 MFSD4BQ5TF39 518 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 DSELQ8IZU8 1212 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 APCDD1Q8J025 514 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 CDRT15Q96T59 188 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 ARMC7Q9H6L4 198 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 RPF2Q9H7B2 306 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 GTSE1Q9NYZ3 720 aa16.91■□□□□ 0.3
SHKBP1-205ENST00000594973 LHX3Q9UBR4 397 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms