RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PADI4Q9UM07 663 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 ST14Q9Y5Y6 855 aa25.42■■□□□ 1.66
TRIM28-204ENST00000594806 SDR42E2A6NKP2 422 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 CCL22O00626 93 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 GPR39O43194 453 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF7P17097 686 aaPredicted RBP25.41■■□□□ 1.66
TRIM28-204ENST00000594806 ACRV1P26436 265 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 ARSDP51689 593 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 TERF1P54274 439 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 PRAMEP78395 509 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 TRAPPC5Q8IUR0 188 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 RASGEF1AQ8N9B8 481 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 ZDHHC1Q8WTX9 485 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 HDAC10Q969S8 669 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 SERPINB12Q96P63 405 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 TREX1Q9NSU2 369 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 SIRPGQ9P1W8 387 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 SOX13Q9UN79 622 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 PRKAB1Q9Y478 270 aa25.41■■□□□ 1.66
TRIM28-204ENST00000594806 PCYT1BQ9Y5K3 369 aaPredicted RBP25.41■■□□□ 1.66
TRIM28-204ENST00000594806 IGLV3-16A0A075B6K0 115 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 CCDC162PA2VCL2 907 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 FAM187AA6NFU0 413 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 NOBOXO60393 691 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 ACP5P13686 325 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 SLC2A4P14672 509 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 IVDP26440 423 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 CA5AP35218 305 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 PPARGP37231 505 aaPredicted RBP25.4■■□□□ 1.66
TRIM28-204ENST00000594806 KCTD19Q17RG1 926 aaPredicted RBP25.4■■□□□ 1.66
TRIM28-204ENST00000594806 INSCQ1MX18 579 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 C14orf28Q4W4Y0 310 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 TMEM220Q6QAJ8 160 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 CRTC3Q6UUV7 619 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 CERS6Q6ZMG9 384 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 TAS2R42Q7RTR8 314 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 RAB44Q7Z6P3 723 aaPredicted RBP25.4■■□□□ 1.66
TRIM28-204ENST00000594806 SERPINA9Q86WD7 417 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 C17orf82Q86X59 251 aaPredicted RBP25.4■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF547Q8IVP9 402 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 KYQ8NBH2 561 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 OR4L1Q8NH43 312 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 ZNF778Q96MU6 729 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 SYBUQ9NX95 663 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 SAMD15Q9P1V8 674 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 SLC2A6Q9UGQ3 507 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 PLEKHM1Q9Y4G2 1056 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 ASXL3Q9C0F0 2248 aa25.4■■□□□ 1.66
TRIM28-204ENST00000594806 CCDC78A2IDD5 438 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 B4DGG1 531 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 TTI1O43156 1089 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 URI1O94763 535 aaPredicted RBP25.39■■□□□ 1.66
TRIM28-204ENST00000594806 PNLIPP16233 465 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 PMLP29590 882 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 FOXN2P32314 431 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 MAGEA3P43357 314 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 ITIH4Q14624 930 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 MORF4L2Q15014 288 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 WHAMMP3Q1A5X7 153 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 IZUMO3Q5VZ72 239 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 OR6P1Q8NGX9 317 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 IFI44Q8TCB0 444 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 FAM96AQ9H5X1 160 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 KLC4Q9NSK0 619 aa25.39■■□□□ 1.66
TRIM28-204ENST00000594806 CPED1A4D0V7 1026 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 OR5K4A6NMS3 321 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 GOT2P00505 430 aaKnown RBP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 ATP1B2P14415 290 aaPredicted RBP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 GLB1P16278 677 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 CRADDP78560 199 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 DMPKQ09013 629 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 HLTFQ14527 1009 aaKnown RBP eCLIP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 BCL7AQ4VC05 210 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 AARS2Q5JTZ9 985 aaKnown RBP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 EFL1Q7Z2Z2 1120 aaKnown RBP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 C11orf96Q7Z7L8 435 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 AMZ2Q86W34 360 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 GALNT15Q8N3T1 639 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 PNPLA1Q8N8W4 532 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 AVL9Q8NBF6 648 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 BBOF1Q8ND07 529 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 WDR48Q8TAF3 677 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 LINC00615Q96LM1 132 aaPredicted RBP25.38■■□□□ 1.65
TRIM28-204ENST00000594806 ANAPC5Q9UJX4 755 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 KCNK6Q9Y257 313 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 KNTC1P50748 2209 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 RP1P56715 2156 aa25.38■■□□□ 1.65
TRIM28-204ENST00000594806 PIKFYVEQ9Y2I7 2098 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 FAM237BA0A1B0GVD1 139 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 GOLGA8MH3BSY2 632 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 QSOX1O00391 747 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 NUDT21O43809 227 aaKnown RBP25.37■■□□□ 1.65
TRIM28-204ENST00000594806 AVILO75366 819 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 PAMP19021 973 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 CTSCP53634 463 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 FASTKD1Q53R41 847 aaKnown RBP25.37■■□□□ 1.65
TRIM28-204ENST00000594806 CASC4Q6P4E1 433 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 GUSBP11Q6P575 273 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 NAGSQ8N159 534 aa25.37■■□□□ 1.65
TRIM28-204ENST00000594806 CACTIN-AS1Q8N1I8 211 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms