RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
APOC1-208ENST00000592535 KIR2DS5A0A0G2JLQ3 304 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 PRAMEF33A0A0G2JMD5 474 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 A0A0G2JNG1 304 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 GLYATL1P3A0A0U1RQE8 302 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 MIF4GDA9UHW6 222 aaKnown RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 KIR2DS3K7RE56 304 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 GAPDHSO14556 408 aaPredicted RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 KMOO15229 486 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 PRAMEF10O60809 474 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 THRAP10827 490 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 CCL4P13236 92 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 ADRA1AP35348 466 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 PPM1FP49593 454 aaPredicted RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 UCNP55089 124 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 GPLD1P80108 840 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 TMEM115Q12893 351 aaPredicted RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 KIR2DS5Q14953 304 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 ZDHHC20Q5W0Z9 365 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 RANBP10Q6VN20 620 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 SLC9B2Q86UD5 537 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 DTX3LQ8TDB6 740 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 USP7Q93009 1102 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 AHCYL2Q96HN2 611 aaKnown RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 TIMM29Q9BSF4 260 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 STN1Q9H668 368 aaKnown RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 FOXJ2Q9P0K8 574 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 SCHIP1Q9P0W5 487 aaPredicted RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 ACSL6Q9UKU0 697 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 SSUH2Q9Y2M2 353 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 AAR2Q9Y312 384 aaKnown RBP13.68□□□□□ -0.22
APOC1-208ENST00000592535 PKP3Q9Y446 797 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 ARL5AQ9Y689 179 aa13.68□□□□□ -0.22
APOC1-208ENST00000592535 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 PRR19A6NJB7 356 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 OR5K4A6NMS3 321 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 C9orf172C9J069 976 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 HGSO14964 777 aaPredicted RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 STX7O15400 261 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 DUX1O43812 170 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 PTMAP06454 111 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 MAPK9P45984 424 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 KLF1Q13351 362 aaPredicted RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
APOC1-208ENST00000592535 GTF2H3Q13889 308 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 TGIF1Q15583 401 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 ARHGAP40Q5TG30 622 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 TMEM71Q6P5X7 295 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 C11orf96Q7Z7L8 435 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 TRAPPC5Q8IUR0 188 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 TTC13Q8NBP0 860 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 HES6Q96HZ4 224 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 DPYSL5Q9BPU6 564 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 TBC1D10AQ9BXI6 508 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
APOC1-208ENST00000592535 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 AKAP7Q9P0M2 348 aaPredicted RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 CPNE7Q9UBL6 633 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 R3HDM2Q9Y2K5 976 aaKnown RBP13.67□□□□□ -0.22
APOC1-208ENST00000592535 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
APOC1-208ENST00000592535 AHCTF1Q8WYP5 2266 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 TEX51A0A1B0GUA7 166 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 TCRBV7S2A1N4TA0A589 114 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 GOLGA6L9A6NEM1 432 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 C5orf60A6NFR6 353 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 PDZK1P1A8MUH7 402 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 PPFIA2O75334 1257 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 FGF3P11487 239 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 LPOP22079 712 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 EPHA4P54764 986 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 MSLNQ13421 630 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 ITGA9Q13797 1035 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 SPARCL1Q14515 664 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 TAF1AQ15573 450 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 GPRC6AQ5T6X5 926 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 ZFAND4Q86XD8 727 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 DDHD1Q8NEL9 900 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 OR4K2Q8NGD2 314 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 BRSK1Q8TDC3 778 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 PMEPA1Q969W9 287 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 TTC25Q96NG3 672 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 TBL1YQ9BQ87 522 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 ZNF624Q9P2J8 865 aaPredicted RBP13.66□□□□□ -0.22
APOC1-208ENST00000592535 FKBPLQ9UIM3 349 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 IGSF10Q6WRI0 2623 aa13.66□□□□□ -0.22
APOC1-208ENST00000592535 LILRA5A6NI73 299 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 C2orf81A6NN90 581 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms