RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 SLC31A1O15431 190 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 SHOX2O60902 331 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 RPP40O75818 363 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 NTRK1P04629 796 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 SRP54P61011 504 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 PYDC2Q56P42 97 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 APTXQ7Z2E3 356 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ALG3Q92685 438 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ARL8BQ9NVJ2 186 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ZNF142P52746 1687 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 PRR5-ARHGAP8B1AHC4 643 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 RFXANKO14593 260 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 SUV39H1O43463 412 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CFIP05156 583 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ARHGAP8P85298 464 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ZC3H7AQ8IWR0 971 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CNTD1Q8N815 330 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 IRF7Q92985 503 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 NKD2Q969F2 451 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 LINGO1Q96FE5 620 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 NDNQ99608 321 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 TDRD1Q9BXT4 1180 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 LGALS13Q9UHV8 139 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 PLK4O00444 970 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 BMP7P18075 431 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 C2orf27AQ580R0 203 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 PERM1Q5SV97 790 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CUZD1Q86UP6 607 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 CCDC185Q8N715 623 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 OR4K2Q8NGD2 314 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 TEX47Q8TBZ9 253 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 NARS2Q96I59 477 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 ING3Q9NXR8 418 aa13.22□□□□□ -0.29
SMARCA4-216ENST00000591545 INPPL1O15357 1258 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 IRAK2O43187 625 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 NR2F1P10589 423 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 ZNF37AP17032 561 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 OGNP20774 298 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 SPIBQ01892 262 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 RFTN2Q52LD8 501 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 UBE2R2Q712K3 238 aaPredicted RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 ZNF554Q86TJ5 538 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 HDDC3Q8N4P3 179 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 METTL21AQ8WXB1 218 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 COX4I2Q96KJ9 171 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 PANX1Q96RD7 426 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 AIF1LQ9BQI0 150 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 WRAP53Q9BUR4 548 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 PHRF1Q9P1Y6 1649 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 LMO2P25791 158 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 POF1BQ8WVV4 589 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 BTRCQ9Y297 605 aa13.21□□□□□ -0.29
SMARCA4-216ENST00000591545 AP3D1O14617 1153 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 MTAPQ13126 283 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 EOGTQ5NDL2 527 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 TDRPQ86YL5 185 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 OR2T12Q8NG77 320 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 BPIFB1Q8TDL5 484 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 GIPC3Q8TF64 312 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 OR52E6Q96RD3 313 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 KCTD15Q96SI1 283 aaPredicted RBP13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 FNDC11Q9BVV2 318 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 FGFBP2Q9BYJ0 223 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 SH3GLB1Q9Y371 365 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 FADS3Q9Y5Q0 445 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 A0A1W2PPM1 405 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 SAGE2PA6NJ88 616 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 G3V2T6 193 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 SSNA1O43805 119 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 BANF1O75531 89 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 IL10RBQ08334 325 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 TAF13Q15543 124 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 PGAM4Q8N0Y7 254 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 RNASE11Q8TAA1 199 aaKnown RBP13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 HMGB4Q8WW32 186 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 TRIB2Q92519 343 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC38A3Q99624 504 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 PNPOQ9NVS9 261 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 WBP11Q9Y2W2 641 aaKnown RBP13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 PCDHGA4Q9Y5G9 962 aa13.21□□□□□ -0.3
SMARCA4-216ENST00000591545 INSIG1O15503 277 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms