RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ZNF7	P17097	686 aa	Predicted RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	OR1D5	P58170	312 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CFHR1	Q03591	330 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	NFATC2	Q13469	925 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PLA2G4E	Q3MJ16	856 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	RBM44	Q6ZP01	1051 aa	Known RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	LRRTM4	Q86VH4	590 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PROSER1	Q86XN7	944 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	ATXN7L3B	Q96GX2	97 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PBK	Q96KB5	322 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CCDC86	Q9H6F5	360 aa	Known RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CASS4	Q9NQ75	786 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PRDM8	Q9NQV8	689 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	KLC4	Q9NSK0	619 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	NLE1	Q9NVX2	485 aa	Predicted RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PAK5	Q9P286	719 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CHD6	Q8TD26	2715 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ITPR1	Q14643	2758 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	TRBV5-4	A0A0C4DH59	114 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ERI2	A8K979	691 aa	Known RBP	17.05	■□□□□ 0.32
MBD1-221	ENST00000589867		D6RAR5	112 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	KMO	O15229	486 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF185	O15231	689 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ZSCAN12	O43309	604 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	FASLG	P48023	281 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	CYP1B1	Q16678	543 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	LDLRAP1	Q5SW96	308 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF574	Q6ZN55	896 aa	Predicted RBP	17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	MAIP1	Q8WWC4	291 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF778	Q96MU6	729 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	OSBPL9	Q96SU4	736 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	TIMM29	Q9BSF4	260 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	FAM96A	Q9H5X1	160 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ASB8	Q9H765	288 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	NEU2	Q9Y3R4	380 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	AHCTF1	Q8WYP5	2266 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	ZFYVE26	Q68DK2	2539 aa		17.05	■□□□□ 0.32
MBD1-221	ENST00000589867	TCRBV7S3A2	A0A539	114 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	SRRM3	A6NNA2	597 aa	Predicted RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	TLX3	O43711	291 aa	Predicted RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	F3	P13726	295 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	CD1C	P29017	333 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	UBE2I	P63279	158 aa	Known RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	ZFP36L1	Q07352	338 aa	Known RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	ITGA9	Q13797	1035 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	SPIDR	Q14159	915 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	CCDC38	Q502W7	563 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF534	Q76KX8	674 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF761	Q86XN6	746 aa	Predicted RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	SLITRK4	Q8IW52	837 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	PIANP	Q8IYJ0	282 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	CCDC89	Q8N998	374 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	OR13J1	Q8NGT2	312 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	WDR48	Q8TAF3	677 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	GDAP1	Q8TB36	358 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	CDKN2AIPNL	Q96HQ2	116 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	GFM1	Q96RP9	751 aa	Known RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	AP1M1	Q9BXS5	423 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	FOXP3	Q9BZS1	431 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF624	Q9P2J8	865 aa	Predicted RBP	17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	SLC2A6	Q9UGQ3	507 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	SNX12	Q9UMY4	172 aa		17.04	■□□□□ 0.32
MBD1-221	ENST00000589867	IGLV3-16	A0A075B6K0	115 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	PRAMEF33	A0A0G2JMD5	474 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	CCDC78	A2IDD5	438 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	BRINP1	O60477	761 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	SNX2	O60749	519 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	MPO	P05164	745 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	APRT	P07741	180 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	MC4R	P32245	332 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	CSF2RB	P32927	897 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	PDE1B	Q01064	536 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	CDH17	Q12864	832 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	NKAIN2	Q5VXU1	208 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	TMEM220	Q6QAJ8	160 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	ABRAXAS1	Q6UWZ7	409 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	SNX20	Q7Z614	316 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	LINC00523	Q86TU6	105 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	NXPE1	Q8N323	547 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	BEND7	Q8N7W2	519 aa	Predicted RBP	17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	STYX	Q8WUJ0	223 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	NXPE2	Q96DL1	559 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	SGF29	Q96ES7	293 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	NUDT22	Q9BRQ3	303 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	SYNDIG1	Q9H7V2	258 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	EIF2B3	Q9NR50	452 aa	Known RBP	17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	DNAJC16	Q9Y2G8	782 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	WDR37	Q9Y2I8	494 aa		17.03	■□□□□ 0.32
MBD1-221	ENST00000589867	PTPRQ	Q9UMZ3	2332 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	IGHV1OR21-1	A0A087WYE8	117 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	OR51F1	A6NGY5	319 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	OR2AG2	A6NM03	316 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	RHPN2P1	A8MT19	583 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	POP7	O75817	140 aa	Known RBP	17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	HOXB3	P14651	431 aa	Predicted RBP	17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	ALDH4A1	P30038	563 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	HADHA	P40939	763 aa		17.02	■□□□□ 0.32
MBD1-221	ENST00000589867	SLC19A1	P41440	591 aa		17.02	■□□□□ 0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms