RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, human

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-209	ENST00000588087	ALDH2	P05091	517 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	UROS	P10746	265 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	CDH2	P19022	906 aa	Predicted RBP	21.33	■■□□□ 1
TMC6-209	ENST00000588087	IL10	P22301	178 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	CLCN2	P51788	898 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	KPNA1	P52294	538 aa	Predicted RBP	21.33	■■□□□ 1
TMC6-209	ENST00000588087	OGFOD2	Q6N063	350 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	GPRIN3	Q6ZVF9	776 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	SPATA19	Q7Z5L4	167 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	KIAA2013	Q8IYS2	634 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	MYRFL	Q96LU7	910 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	GLT1D1	Q96MS3	346 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	CASD1	Q96PB1	797 aa		21.33	■■□□□ 1
TMC6-209	ENST00000588087	KCTD14	Q9BQ13	255 aa	Predicted RBP	21.33	■■□□□ 1
TMC6-209	ENST00000588087	LIN28A	Q9H9Z2	209 aa	Known RBP	21.33	■■□□□ 1
TMC6-209	ENST00000588087	CCDC154	A6NI56	674 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	HNRNPR	O43390	633 aa	Known RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	VPS4B	O75351	444 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	SLC22A3	O75751	556 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	SEC24D	O94855	1032 aa	Predicted RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	C1R	P00736	705 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	F11	P03951	625 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	ZNF23	P17027	643 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	CORO1A	P31146	461 aa	Known RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	RNF219	Q5W0B1	726 aa	Predicted RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	FNDC5	Q8NAU1	212 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	MUC3B	Q9H195	1237 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	FRMPD3	Q5JV73	1810 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	E2F3	O00716	465 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	STX16	O14662	325 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	STX7	O15400	261 aa	Known RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	TBC1D4	O60343	1298 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	CHEK2	O96017	543 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	FAS	P25445	335 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	HTR6	P50406	440 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	IL2	P60568	153 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	ILF2	Q12905	390 aa	Known RBP	21.32	■■□□□ 1
TMC6-209	ENST00000588087	BIRC2	Q13490	618 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	SLC2A7	Q6PXP3	512 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	ZNF786	Q8N393	782 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	TRIM54	Q9BYV2	358 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	PCDHB7	Q9Y5E2	793 aa		21.32	■■□□□ 1
TMC6-209	ENST00000588087	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	RNF103-CHMP3	A0A140T963	221 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087		E5RI56	91 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	KLK8	O60259	260 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	PRAMEF12	O95522	483 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	POLR2J	P52435	117 aa	Known RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	ERVPABLB-1	P60509	514 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	ARF5	P84085	180 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	SREBF2	Q12772	1141 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	ZNF177	Q13360	481 aa	Predicted RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	AAK1	Q2M2I8	961 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	LETMD1	Q6P1Q0	360 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	DBF4B	Q8NFT6	615 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	OR56A4	Q8NGH8	313 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	ANKRD66	B4E2M5	251 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	GIPC1	O14908	333 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	SYNCRIP	O60506	623 aa	Known RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	MLYCD	O95822	493 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	ACBD5	Q5T8D3	534 aa	Predicted RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	IRAK1BP1	Q5VVH5	260 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	CAMK1D	Q8IU85	385 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	FBXL20	Q96IG2	436 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	ADI1	Q9BV57	179 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	NUSAP1	Q9BXS6	441 aa	Known RBP	21.31	■■□□□ 1
TMC6-209	ENST00000588087	ETAA1	Q9NY74	926 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	GREB1	Q4ZG55	1949 aa		21.31	■■□□□ 1
TMC6-209	ENST00000588087	CLDN11	O75508	207 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	EED	O75530	441 aa	Known RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	TMCC1	O94876	653 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	ITGB6	P18564	788 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	TTPA	P49638	278 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	PLIN5	Q00G26	463 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	FOXM1	Q08050	763 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	TWF1	Q12792	350 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	C6orf136	Q5SQH8	315 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	CYGB	Q8WWM9	190 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	PHF12	Q96QT6	1004 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	SOX17	Q9H6I2	414 aa	Predicted RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	CLK4	Q9HAZ1	481 aa	Known RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	ARIH1	Q9Y4X5	557 aa	Predicted RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	HEMK1	Q9Y5R4	338 aa	Predicted RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	TCRBV5S2	A0A599	114 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	ZNF840P	A6NDX5	716 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	EI24	O14681	340 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	NBN	O60934	754 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	STC2	O76061	302 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	CTPS1	P17812	591 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	CCT8	P50990	548 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	PABPC1L	Q4VXU2	614 aa	Known RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	COQ5	Q5HYK3	327 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	INTS11	Q5TA45	600 aa	Known RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	TXNDC11	Q6PKC3	985 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	RALGPS2	Q86X27	583 aa	Predicted RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	TTC30B	Q8N4P2	665 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	TMEM199	Q8N511	208 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	CENPN	Q96H22	339 aa	Predicted RBP	21.3	■■□□□ 1
TMC6-209	ENST00000588087	SEPHS2	Q99611	448 aa		21.3	■■□□□ 1
TMC6-209	ENST00000588087	C1QTNF3	Q9BXJ4	246 aa		21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms