RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 OR13C4Q8NGS5 318 aa13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 CDKN2AIPNLQ96HQ2 116 aa13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 DNAJC1Q96KC8 554 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 LINC00615Q96LM1 132 aaPredicted RBP13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 COPS8Q99627 209 aa13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 GULP1Q9UBP9 304 aa13.63□□□□□ -0.23
PRKCSH-202ENST00000585540 WDR87Q6ZQQ6 2873 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 ARHGEF17Q96PE2 2063 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 IGLV3-16A0A075B6K0 115 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 C17orf113A0A1B0GUU1 675 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 MAGEB16A2A368 324 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 CPED1A4D0V7 1026 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 OPA1O60313 960 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 AP2A2O94973 939 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 ACP5P13686 325 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 JUPP14923 745 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 AK4P27144 223 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 AKT1P31749 480 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 VPS41P49754 854 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 PRAMEP78395 509 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 INSM1Q01101 510 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 GPS1Q13098 491 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 KCNJ11Q14654 390 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 TSTD2Q5T7W7 516 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 AGAP9Q5VTM2 703 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 CDCP2Q5VXM1 449 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 SLC30A9Q6PML9 568 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 SLC9B2Q86UD5 537 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 NAGSQ8N159 534 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 MPP5Q8N3R9 675 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 PNPLA1Q8N8W4 532 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 DCBLD1Q8N8Z6 715 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 ZNF592Q92610 1267 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 NRSN2Q9GZP1 204 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 UCK1Q9HA47 277 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 POT1Q9NUX5 634 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 NEU2Q9Y3R4 380 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 PTPRBP23467 1997 aa13.62□□□□□ -0.23
PRKCSH-202ENST00000585540 PLXNB3Q9ULL4 1909 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 KIF2AO00139 706 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 NTN3O00634 580 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PFDN6O15212 129 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 BUD23O43709 281 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 MT-CO3P00414 261 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PAMP19021 973 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 IDSP22304 550 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 ACRV1P26436 265 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 HALP42357 657 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 NSG1P42857 185 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PRLHRP49683 370 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 TERF1P54274 439 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 EPHA4P54764 986 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 GPLD1P80108 840 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 EIF3IQ13347 325 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PTK6Q13882 451 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 SPIDRQ14159 915 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PPP1R7Q15435 360 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 ABRAXAS1Q6UWZ7 409 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 RBM44Q6ZP01 1051 aaKnown RBP13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 HOOK3Q86VS8 718 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 AMZ2Q86W34 360 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 KLHL7Q8IXQ5 586 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 PPIL6Q8IXY8 311 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 SFRP1Q8N474 314 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 CCL4L1Q8NHW4 92 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 CCDC74AQ96AQ1 378 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 TMEM74Q96NL1 305 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 CCDC3Q9BQI4 270 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 SIRPGQ9P1W8 387 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 DKK4Q9UBT3 224 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 TMPRSS11EQ9UL52 423 aa13.61□□□□□ -0.23
PRKCSH-202ENST00000585540 A6NCN8 305 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 RHPN2P1A8MT19 583 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A9O60656 530 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ATP1B2P14415 290 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 TPH1P17752 444 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 XRCC1P18887 633 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A6P19224 532 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A1P22309 533 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A4P22310 534 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A3P35503 534 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 UGT1A5P35504 534 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 PLOD1Q02809 727 aaPredicted RBP13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 C2orf54Q08AI8 447 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 SQSTM1Q13501 440 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ZRANB3Q5FWF4 1079 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ZNF449Q6P9G9 518 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 IYDQ6PHW0 289 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 CCNJLQ8IV13 435 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ZNF547Q8IVP9 402 aa13.6□□□□□ -0.23
PRKCSH-202ENST00000585540 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms