RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 AGTP01019 485 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 PTMAP06454 111 aaKnown RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 JMJD7P0C870 316 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 THRAP10827 490 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 ZNF7P17097 686 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 LPOP22079 712 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 LIMK2P53671 638 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 UBE2IP63279 158 aaKnown RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 PDE1BQ01064 536 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 MSLNQ13421 630 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 LDLRAP1Q5SW96 308 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 ZNF648Q5T619 568 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 PHF19Q5T6S3 580 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 AGAP9Q5VTM2 703 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 KCTD11Q693B1 232 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 WDR74Q6RFH5 385 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 CRTC3Q6UUV7 619 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 ZNF574Q6ZN55 896 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 C11orf96Q7Z7L8 435 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 SLC9B2Q86UD5 537 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 OR10G6Q8NH81 332 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 SNRNP27Q8WVK2 155 aaKnown RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 LRRC45Q96CN5 670 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 RTP4Q96DX8 246 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 FRMD8P1Q9BZ68 369 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 SEMA6CQ9H3T2 930 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 ARFGAP3Q9NP61 516 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 KLC4Q9NSK0 619 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 AKAP7Q9P0M2 348 aaPredicted RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 PDP2Q9P2J9 529 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 RALYQ9UKM9 306 aaKnown RBP12.97□□□□□ -0.33
ERBB2-220ENST00000584684 CFAP46Q8IYW2 2715 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 ATMQ13315 3056 aa12.97□□□□□ -0.33
ERBB2-220ENST00000584684 C2orf81A6NN90 581 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 STX7O15400 261 aaKnown RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 KCNJ13O60928 360 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 MTX2O75431 263 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 PRAMEF1O95521 474 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 VCLP18206 1134 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 XRCC1P18887 633 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 ZNF140P52738 457 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 TMPRSS3P57727 454 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 DMPKQ09013 629 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 TMEM115Q12893 351 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 C16orf72Q14CZ0 275 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 CHRNA6Q15825 494 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 INSCQ1MX18 579 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 PARP6Q2NL67 630 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 P3H1Q32P28 736 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 GPRC6AQ5T6X5 926 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 BROXQ5VW32 411 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 DENND5AQ6IQ26 1287 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 TMEM71Q6P5X7 295 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 ABRAXAS1Q6UWZ7 409 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 FAM151BQ6UXP7 276 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 ARHGEF18Q6ZSZ5 1173 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 CRELD1Q96HD1 420 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 ZNF514Q96K75 400 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 SLC38A3Q99624 504 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 TBL1YQ9BQ87 522 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 CPNE7Q9UBL6 633 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 PISDQ9UG56 409 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 SLC23A2Q9UGH3 650 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
ERBB2-220ENST00000584684 ARL5AQ9Y689 179 aa12.96□□□□□ -0.33
ERBB2-220ENST00000584684 MN1Q10571 1320 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-220ENST00000584684 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-220ENST00000584684 SNX2O60749 519 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 CRTAMO95727 393 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 HGFP14210 728 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 CD82P27701 267 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 SLC5A2P31639 672 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 CFHR1Q03591 330 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 CLN3Q13286 438 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 GTF2H3Q13889 308 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 NKAIN2Q5VXU1 208 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 USP53Q70EK8 1073 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 TRAPPC5Q8IUR0 188 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
ERBB2-220ENST00000584684 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 GDAP1Q8TB36 358 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 FCRL3Q96P31 734 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-220ENST00000584684 OSGEPL1Q9H4B0 414 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 LRRC40Q9H9A6 602 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 PRDM8Q9NQV8 689 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 POT1Q9NUX5 634 aa12.95□□□□□ -0.34
ERBB2-220ENST00000584684 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms