RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 ATP13A3Q9H7F0 1226 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 PLAC1Q9HBJ0 212 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 TMBIM4Q9HC24 238 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 STARD5Q9NSY2 213 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 MOCS1Q9NZB8 636 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 SLC24A2Q9UI40 661 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 RIMKLBQ9ULI2 386 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 PPM1HQ9ULR3 514 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 TCAF1Q9Y4C2 921 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 FAM169AQ9Y6X4 670 aa17.77■□□□□ 0.44
SNX11-212ENST00000583320 EXOC1LA0A1B0GW35 172 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 A0A1W2PQU0 124 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 GOLGA8KD6RF30 607 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 SCAMP1O15126 338 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 HTRA2O43464 458 aaPredicted RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 SYF2O95926 243 aaKnown RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 PRLP01236 227 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 ALPPL2P10696 532 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 TPH1P17752 444 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 ITGB6P18564 788 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 CHRNA4P43681 627 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 RECQLP46063 649 aaPredicted RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 CRADDP78560 199 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 BCL2L1Q07817 233 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 TRAF2Q12933 501 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 NAB1Q13506 487 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 CRYMQ14894 314 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 KRT71Q3SY84 523 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 ANKRD20A4Q4UJ75 823 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 AGBL2Q5U5Z8 902 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 CLEC14AQ86T13 490 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 SLC25A41Q8N5S1 370 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 UHMK1Q8TAS1 419 aaKnown RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 OR8D1Q8WZ84 308 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 PGM2Q96G03 612 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 ZNF641Q96N77 438 aaPredicted RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 SRPK1Q96SB4 655 aaKnown RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 PREBQ9HCU5 417 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 PIH1D1Q9NWS0 290 aaKnown RBP17.76■□□□□ 0.43
SNX11-212ENST00000583320 CHKBQ9Y259 395 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 PCDHGA8Q9Y5G5 932 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 RPS6KL1Q9Y6S9 549 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 NBASA2RRP1 2371 aa17.76■□□□□ 0.43
SNX11-212ENST00000583320 CPED1A4D0V7 1026 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 CDH16O75309 829 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 PGLSO95336 258 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 C1QAP02745 245 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 SERPINA4P29622 427 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 ACCSLQ4AC99 568 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 ARMC12Q5T9G4 340 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 Q6ZVU0 165 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 EFL1Q7Z2Z2 1120 aaKnown RBP17.75■□□□□ 0.43
SNX11-212ENST00000583320 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNX11-212ENST00000583320 ZNF548Q8NEK5 533 aaPredicted RBP17.75■□□□□ 0.43
SNX11-212ENST00000583320 BRSK1Q8TDC3 778 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 EXTL1Q92935 676 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 CCNL2Q96S94 520 aaPredicted RBP17.75■□□□□ 0.43
SNX11-212ENST00000583320 DHRS4Q9BTZ2 278 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 TNKS2Q9H2K2 1166 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 DNAJC28Q9NX36 388 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 HACD3Q9P035 362 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 VPS18Q9P253 973 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 HECAQ9UBI9 543 aaPredicted RBP17.75■□□□□ 0.43
SNX11-212ENST00000583320 LGALS13Q9UHV8 139 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 PCDHGC4Q9Y5F7 938 aa17.75■□□□□ 0.43
SNX11-212ENST00000583320 ZCWPW2A0A1B0GU75 182 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 FAM159BA6NKW6 160 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 ANKRD66B4E2M5 251 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 TRAFD1O14545 582 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 SUV39H1O43463 412 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 TNFSF15O95150 251 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 CTSLP07711 333 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 DUSP3P51452 185 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 CCNHP51946 323 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 POU6F1Q14863 301 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 PERM1Q5SV97 790 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 ATG14Q6ZNE5 492 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 CAPN12Q6ZSI9 719 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 KDELC2Q7Z4H8 507 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 ABI3BPQ7Z7G0 1075 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 OR2A12Q8NGT7 310 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 CDKL2Q92772 493 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 ZNF669Q96BR6 464 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 CCDC97Q96F63 343 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 C19orf43Q9BQ61 176 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 STMN4Q9H169 189 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 GPR27Q9NS67 375 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 EURLQ9NYK6 297 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 KLF15Q9UIH9 416 aa17.74■□□□□ 0.43
SNX11-212ENST00000583320 ATXN7L1Q9ULK2 861 aaPredicted RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 ZFR2Q9UPR6 939 aaKnown RBP17.74■□□□□ 0.43
SNX11-212ENST00000583320 MROH6A6NGR9 719 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 HMGB1P1B2RPK0 211 aaPredicted RBP17.73■□□□□ 0.43
SNX11-212ENST00000583320 FAM87AP0C7U9 286 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 PAMP19021 973 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 PSMA3P25788 255 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 MGAT5Q09328 741 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 FZD2Q14332 565 aa17.73■□□□□ 0.43
SNX11-212ENST00000583320 GALNT3Q14435 633 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms